Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18g07
(604 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X97758-1|CAA66352.1| 244|Homo sapiens memB protein. 30 7.2
X95282-1|CAA64603.1| 244|Homo sapiens Rho8 protein protein. 30 7.2
S82240-1|AAB47133.1| 229|Homo sapiens RhoE protein. 30 7.2
CR542070-1|CAG46867.1| 229|Homo sapiens ARHE protein. 30 7.2
CR542038-1|CAG46835.1| 229|Homo sapiens ARHE protein. 30 7.2
BT006769-1|AAP35415.1| 244|Homo sapiens ras homolog gene family... 30 7.2
BC012513-1|AAH12513.1| 244|Homo sapiens Rho family GTPase 3 pro... 30 7.2
AF498969-1|AAM21116.1| 244|Homo sapiens small GTP binding prote... 30 7.2
AC093738-1|AAX88953.1| 128|Homo sapiens unknown protein. 30 7.2
>X97758-1|CAA66352.1| 244|Homo sapiens memB protein.
Length = 244
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 177 KNKMSTSNITLIDLNT--QLPFEIDEKLKSELCFAETLVISCGHCEGENEAEDLFSDSES 350
K+ + T TL++L+ Q P D+ I C + EN D+F +
Sbjct: 136 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 195
Query: 351 SCFDATESEI 380
+C + T +
Sbjct: 196 ACVNKTNKNV 205
>X95282-1|CAA64603.1| 244|Homo sapiens Rho8 protein protein.
Length = 244
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 177 KNKMSTSNITLIDLNT--QLPFEIDEKLKSELCFAETLVISCGHCEGENEAEDLFSDSES 350
K+ + T TL++L+ Q P D+ I C + EN D+F +
Sbjct: 136 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 195
Query: 351 SCFDATESEI 380
+C + T +
Sbjct: 196 ACVNKTNKNV 205
>S82240-1|AAB47133.1| 229|Homo sapiens RhoE protein.
Length = 229
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 177 KNKMSTSNITLIDLNT--QLPFEIDEKLKSELCFAETLVISCGHCEGENEAEDLFSDSES 350
K+ + T TL++L+ Q P D+ I C + EN D+F +
Sbjct: 121 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 180
Query: 351 SCFDATESEI 380
+C + T +
Sbjct: 181 ACVNKTNKNV 190
>CR542070-1|CAG46867.1| 229|Homo sapiens ARHE protein.
Length = 229
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 177 KNKMSTSNITLIDLNT--QLPFEIDEKLKSELCFAETLVISCGHCEGENEAEDLFSDSES 350
K+ + T TL++L+ Q P D+ I C + EN D+F +
Sbjct: 121 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 180
Query: 351 SCFDATESEI 380
+C + T +
Sbjct: 181 ACVNKTNKNV 190
>CR542038-1|CAG46835.1| 229|Homo sapiens ARHE protein.
Length = 229
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 177 KNKMSTSNITLIDLNT--QLPFEIDEKLKSELCFAETLVISCGHCEGENEAEDLFSDSES 350
K+ + T TL++L+ Q P D+ I C + EN D+F +
Sbjct: 121 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 180
Query: 351 SCFDATESEI 380
+C + T +
Sbjct: 181 ACVNKTNKNV 190
>BT006769-1|AAP35415.1| 244|Homo sapiens ras homolog gene family,
member E protein.
Length = 244
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 177 KNKMSTSNITLIDLNT--QLPFEIDEKLKSELCFAETLVISCGHCEGENEAEDLFSDSES 350
K+ + T TL++L+ Q P D+ I C + EN D+F +
Sbjct: 136 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 195
Query: 351 SCFDATESEI 380
+C + T +
Sbjct: 196 ACVNKTNKNV 205
>BC012513-1|AAH12513.1| 244|Homo sapiens Rho family GTPase 3
protein.
Length = 244
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 177 KNKMSTSNITLIDLNT--QLPFEIDEKLKSELCFAETLVISCGHCEGENEAEDLFSDSES 350
K+ + T TL++L+ Q P D+ I C + EN D+F +
Sbjct: 136 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 195
Query: 351 SCFDATESEI 380
+C + T +
Sbjct: 196 ACVNKTNKNV 205
>AF498969-1|AAM21116.1| 244|Homo sapiens small GTP binding protein
Rho8 protein.
Length = 244
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 177 KNKMSTSNITLIDLNT--QLPFEIDEKLKSELCFAETLVISCGHCEGENEAEDLFSDSES 350
K+ + T TL++L+ Q P D+ I C + EN D+F +
Sbjct: 136 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 195
Query: 351 SCFDATESEI 380
+C + T +
Sbjct: 196 ACVNKTNKNV 205
>AC093738-1|AAX88953.1| 128|Homo sapiens unknown protein.
Length = 128
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 177 KNKMSTSNITLIDLNT--QLPFEIDEKLKSELCFAETLVISCGHCEGENEAEDLFSDSES 350
K+ + T TL++L+ Q P D+ I C + EN D+F +
Sbjct: 20 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 79
Query: 351 SCFDATESEI 380
+C + T +
Sbjct: 80 ACVNKTNKNV 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,855,578
Number of Sequences: 237096
Number of extensions: 1279649
Number of successful extensions: 5850
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5849
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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