Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18g06
(666 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 29 0.040
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 29 0.040
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 1.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.5
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 22 4.6
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 4.6
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 4.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 4.6
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 22 6.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 6.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.0
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 29.1 bits (62), Expect = 0.040
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 622 FLKDFLAGGISAAIS 666
F KDFLAGG++AAIS
Sbjct: 10 FAKDFLAGGVAAAIS 24
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 29.1 bits (62), Expect = 0.040
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 622 FLKDFLAGGISAAIS 666
F KDFLAGG++AAIS
Sbjct: 10 FAKDFLAGGVAAAIS 24
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 479 FEECLIFHPTLLNPDINPWVISYWSVFREC 568
FEE + + T+ N NPW + +W +C
Sbjct: 408 FEEYFL-NLTVENNRRNPWFVEFWEHHFQC 436
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFSSILSPLKCEMQKLKFLN 301
I+ NN LS+ ++ N NN+++ + ++Q +N
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIIN 119
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 297 RNFNFCISHFSGLRIEEKLFQFLVTSNSCDNKLFVNKI 184
RNF+ C SH + I F+ S L +NK+
Sbjct: 114 RNFSTCSSHPTAAFISYGTLFFIYVQPSATFSLDLNKV 151
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 3/22 (13%)
Frame = +2
Query: 512 LNPDIN---PWVISYWSVFREC 568
L PD N PW YW +C
Sbjct: 270 LTPDTNRRNPWFSEYWEEVFDC 291
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 147 CMALNCLNPYFY 112
C A+ CL+PY Y
Sbjct: 317 CKAVACLDPYVY 328
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 3/22 (13%)
Frame = +2
Query: 512 LNPDIN---PWVISYWSVFREC 568
L PD N PW YW +C
Sbjct: 360 LTPDTNRRNPWFSEYWEEVFDC 381
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.8 bits (44), Expect = 6.0
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 297 RNFNFCISHFSGLRIEEKLFQFLVTSNSCDNKLFVNKI 184
RNF+ C SH + I F+ S L +NK+
Sbjct: 115 RNFSTCSSHPTAAFISYGTLFFIYVHPSATFSLDLNKV 152
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYN 102
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYN 102
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYN 102
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYN 102
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYN 102
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYN 102
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYN 102
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYN 102
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYN 335
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYN 335
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 185 ILLTNNLLSHEFDVTRN*NNFS 250
I+ NN LS+ ++ N NN++
Sbjct: 81 IISNNNPLSNNYNYNNNYNNYN 102
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,619
Number of Sequences: 438
Number of extensions: 3578
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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