Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18g02
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0321 - 17508536-17508657,17508939-17509191                       30   1.4  
10_01_0164 + 1863890-1866253                                           27   9.9  
05_05_0377 - 24498664-24500215,24500306-24500643                       27   9.9  
04_04_1454 - 33715782-33715797,33715887-33715918,33716582-33716920     27   9.9  
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118...    27   9.9  

>12_02_0321 - 17508536-17508657,17508939-17509191
          Length = 124

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = +2

Query: 500 AWSRRTGLSSSDRRRCFGPEIKTWDIIIGVTE--PLGATSAEI 622
           AW    G S      C GP +  W  +IGV E  PLG   A I
Sbjct: 26  AWRWGVG-SGRPAENCLGPRVWIWTTLIGVVEIGPLGCLLASI 67


>10_01_0164 + 1863890-1866253
          Length = 787

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = -2

Query: 639 IHKWLIIS--ADVAPNGSVTPMIISQV---FISGPKHLLRSEELSPVLRDQ 502
           +  WL +S  +DVAP+ SV+P II  +        + L RS EL P    Q
Sbjct: 313 LETWLFLSCFSDVAPHDSVSPFIIDIIPYALDDREEMLRRSIELRPCTHPQ 363


>05_05_0377 - 24498664-24500215,24500306-24500643
          Length = 629

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 115 PGV-EADRRLLPFVTWEEYLDSLIDIAD 195
           PG  EA RRL P VT+E+ L  ++ IA+
Sbjct: 68  PGADEAFRRLAPLVTYEDILPDVLRIAN 95


>04_04_1454 - 33715782-33715797,33715887-33715918,33716582-33716920
          Length = 128

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 112 PPGVEADRRLLPFVTWEEYLDSLIDIAD-LRNLRS 213
           PP  EA RRL+P     EY   L + AD LR+LR+
Sbjct: 78  PPRAEALRRLVPGGAGMEYSSLLEETADYLRSLRA 112


>01_05_0740 -
           24809951-24810394,24810622-24810700,24811651-24811809,
           24812083-24812246,24812436-24812624,24813151-24813408,
           24813463-24813951,24814062-24814262,24814368-24814639,
           24814661-24814685,24814776-24814937,24815065-24815104,
           24815244-24815353,24815812-24815898,24816013-24816507
          Length = 1057

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
 Frame = +1

Query: 364 IDDPFSRELAIRERANRVGILQSIIFIRHFTKGGFEISGYIDYAH-RLVSE----NWAQF 528
           IDD FS      ERA+ +  ++  +    F K   ++SG+ID    +  SE     W + 
Sbjct: 599 IDDTFSLMAWEEERADEIANIKKRLEEEEFWKEHLQVSGWIDIMQLKERSEQPHGTWEEV 658

Query: 529 FRSKKMLWPRDKDL 570
           +R+ K +     DL
Sbjct: 659 YRNVKRVERMKNDL 672


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,681,392
Number of Sequences: 37544
Number of extensions: 418957
Number of successful extensions: 1151
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)