Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18f23
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC060317-1|AAH60317.1| 71|Homo sapiens general transcription f... 102 1e-21
BC056906-1|AAH56906.1| 71|Homo sapiens general transcription f... 102 1e-21
AL590703-3|CAH70241.1| 71|Homo sapiens protein ( Human DNA seq... 102 1e-21
AJ634743-1|CAG25512.1| 71|Homo sapiens TFIIH basal transcripti... 102 1e-21
U61837-1|AAB88578.1| 154|Homo sapiens putative cyclin G1 intera... 99 1e-20
CR456992-1|CAG33273.1| 154|Homo sapiens ZNHIT1 protein. 99 1e-20
BC017333-1|AAH17333.1| 154|Homo sapiens zinc finger, HIT type 1... 99 1e-20
AF093571-1|AAF03558.1| 154|Homo sapiens cyclin G1 binding prote... 99 1e-20
AC004876-6|AAD45833.1| 154|Homo sapiens putative cyclin G1 inte... 99 1e-20
BC048989-1|AAH48989.1| 137|Homo sapiens C18orf37 protein protein. 33 0.67
BC039404-1|AAH39404.1| 192|Homo sapiens chromosome 18 open read... 33 0.67
BC061592-1|AAH61592.1| 255|Homo sapiens transmembrane protein 8... 31 3.6
AY359081-1|AAQ89440.1| 255|Homo sapiens KVLA2788 protein. 31 3.6
AL583832-4|CAI15289.1| 255|Homo sapiens novel protein protein. 31 3.6
Z99572-8|CAI23064.1| 753|Homo sapiens selectin P (granule membr... 31 4.7
Z99572-7|CAI23063.1| 829|Homo sapiens selectin P (granule membr... 31 4.7
Z99572-6|CAI23062.1| 645|Homo sapiens selectin P (granule membr... 31 4.7
Z99572-5|CAI23058.1| 830|Homo sapiens selectin P (granule membr... 31 4.7
Z99572-4|CAI23060.1| 646|Homo sapiens selectin P (granule membr... 31 4.7
Z99572-2|CAI23059.1| 644|Homo sapiens selectin P (granule membr... 31 4.7
Z99572-1|CAI23061.1| 768|Homo sapiens selectin P (granule membr... 31 4.7
M60234-1|AAA35910.1| 830|Homo sapiens granule membrane protein-... 31 4.7
M25322-1|AAA35911.1| 830|Homo sapiens protein ( Human granule m... 31 4.7
BC068533-1|AAH68533.1| 829|Homo sapiens selectin P (granule mem... 31 4.7
BC028067-1|AAH28067.2| 789|Homo sapiens SELP protein protein. 31 4.7
AL022146-8|CAI22758.1| 753|Homo sapiens selectin P (granule mem... 31 4.7
AL022146-7|CAI22757.1| 829|Homo sapiens selectin P (granule mem... 31 4.7
AL022146-6|CAI22756.1| 645|Homo sapiens selectin P (granule mem... 31 4.7
AL022146-5|CAI22753.1| 830|Homo sapiens selectin P (granule mem... 31 4.7
AL022146-4|CAI22755.1| 646|Homo sapiens selectin P (granule mem... 31 4.7
AL022146-2|CAI22754.1| 644|Homo sapiens selectin P (granule mem... 31 4.7
AL022146-1|CAI22751.1| 768|Homo sapiens selectin P (granule mem... 31 4.7
AF542391-1|AAN06828.1| 830|Homo sapiens selectin P (granule mem... 31 4.7
AK095502-1|BAC04560.1| 197|Homo sapiens protein ( Homo sapiens ... 30 6.2
>BC060317-1|AAH60317.1| 71|Homo sapiens general transcription
factor IIH, polypeptide 5 protein.
Length = 71
Score = 102 bits (244), Expect = 1e-21
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +1
Query: 22 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 201
MVNV+KGVL+ECDPAMKQFLL+LDE+ ALG+KFI+QD+D+TH+F+ A++V LQ RV +L
Sbjct: 1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGEL 60
Query: 202 MDQLSIPVHDK 234
MDQ + + K
Sbjct: 61 MDQNAFSLTQK 71
>BC056906-1|AAH56906.1| 71|Homo sapiens general transcription
factor IIH, polypeptide 5 protein.
Length = 71
Score = 102 bits (244), Expect = 1e-21
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +1
Query: 22 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 201
MVNV+KGVL+ECDPAMKQFLL+LDE+ ALG+KFI+QD+D+TH+F+ A++V LQ RV +L
Sbjct: 1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGEL 60
Query: 202 MDQLSIPVHDK 234
MDQ + + K
Sbjct: 61 MDQNAFSLTQK 71
>AL590703-3|CAH70241.1| 71|Homo sapiens protein ( Human DNA
sequence from clone RP11-120J8 on chromosome 6 Contains
the 5' end of the gene for hypothetical protein
FLJ14917, a novel ).
Length = 71
Score = 102 bits (244), Expect = 1e-21
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +1
Query: 22 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 201
MVNV+KGVL+ECDPAMKQFLL+LDE+ ALG+KFI+QD+D+TH+F+ A++V LQ RV +L
Sbjct: 1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGEL 60
Query: 202 MDQLSIPVHDK 234
MDQ + + K
Sbjct: 61 MDQNAFSLTQK 71
>AJ634743-1|CAG25512.1| 71|Homo sapiens TFIIH basal transcription
factor complex TTDA subunit protein.
Length = 71
Score = 102 bits (244), Expect = 1e-21
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +1
Query: 22 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 201
MVNV+KGVL+ECDPAMKQFLL+LDE+ ALG+KFI+QD+D+TH+F+ A++V LQ RV +L
Sbjct: 1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGEL 60
Query: 202 MDQLSIPVHDK 234
MDQ + + K
Sbjct: 61 MDQNAFSLTQK 71
>U61837-1|AAB88578.1| 154|Homo sapiens putative cyclin G1
interacting protein protein.
Length = 154
Score = 99.1 bits (236), Expect = 1e-20
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +1
Query: 274 RESGRVKDAERRKVXXXXXXXXXXXXXXXXXXQDNFHEDPHADLV-MSKKVPKFADSNEK 450
+ S R +D +R+V DNF +DPHA L + K++P+F D +
Sbjct: 5 KTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADT 64
Query: 451 PTRKKKSKSAEYYKMRFRKTFAQLVEEDASFRSKPPNYLSAQAPPSKFPERHFCAVCGFP 630
+KKK++ +++K+RFRK F L+EE ++ PNYL+A A P P+R FCAVCGFP
Sbjct: 65 GKKKKKTRG-DHFKLRFRKNFQALLEEQNLSVAEGPNYLTACAGPPSRPQRPFCAVCGFP 123
Query: 631 SNYTCI 648
S YTC+
Sbjct: 124 SPYTCV 129
>CR456992-1|CAG33273.1| 154|Homo sapiens ZNHIT1 protein.
Length = 154
Score = 99.1 bits (236), Expect = 1e-20
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +1
Query: 274 RESGRVKDAERRKVXXXXXXXXXXXXXXXXXXQDNFHEDPHADLV-MSKKVPKFADSNEK 450
+ S R +D +R+V DNF +DPHA L + K++P+F D +
Sbjct: 5 KTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADT 64
Query: 451 PTRKKKSKSAEYYKMRFRKTFAQLVEEDASFRSKPPNYLSAQAPPSKFPERHFCAVCGFP 630
+KKK++ +++K+RFRK F L+EE ++ PNYL+A A P P+R FCAVCGFP
Sbjct: 65 GKKKKKTRG-DHFKLRFRKNFQALLEEQNLSVAEGPNYLTACAGPPSRPQRPFCAVCGFP 123
Query: 631 SNYTCI 648
S YTC+
Sbjct: 124 SPYTCV 129
>BC017333-1|AAH17333.1| 154|Homo sapiens zinc finger, HIT type 1
protein.
Length = 154
Score = 99.1 bits (236), Expect = 1e-20
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +1
Query: 274 RESGRVKDAERRKVXXXXXXXXXXXXXXXXXXQDNFHEDPHADLV-MSKKVPKFADSNEK 450
+ S R +D +R+V DNF +DPHA L + K++P+F D +
Sbjct: 5 KTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADT 64
Query: 451 PTRKKKSKSAEYYKMRFRKTFAQLVEEDASFRSKPPNYLSAQAPPSKFPERHFCAVCGFP 630
+KKK++ +++K+RFRK F L+EE ++ PNYL+A A P P+R FCAVCGFP
Sbjct: 65 GKKKKKTRG-DHFKLRFRKNFQALLEEQNLSVAEGPNYLTACAGPPSRPQRPFCAVCGFP 123
Query: 631 SNYTCI 648
S YTC+
Sbjct: 124 SPYTCV 129
>AF093571-1|AAF03558.1| 154|Homo sapiens cyclin G1 binding protein
1 protein.
Length = 154
Score = 99.1 bits (236), Expect = 1e-20
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +1
Query: 274 RESGRVKDAERRKVXXXXXXXXXXXXXXXXXXQDNFHEDPHADLV-MSKKVPKFADSNEK 450
+ S R +D +R+V DNF +DPHA L + K++P+F D +
Sbjct: 5 KTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADT 64
Query: 451 PTRKKKSKSAEYYKMRFRKTFAQLVEEDASFRSKPPNYLSAQAPPSKFPERHFCAVCGFP 630
+KKK++ +++K+RFRK F L+EE ++ PNYL+A A P P+R FCAVCGFP
Sbjct: 65 GKKKKKTRG-DHFKLRFRKNFQALLEEQNLSVAEGPNYLTACAGPPSRPQRPFCAVCGFP 123
Query: 631 SNYTCI 648
S YTC+
Sbjct: 124 SPYTCV 129
>AC004876-6|AAD45833.1| 154|Homo sapiens putative cyclin G1
interacting protein protein.
Length = 154
Score = 99.1 bits (236), Expect = 1e-20
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +1
Query: 274 RESGRVKDAERRKVXXXXXXXXXXXXXXXXXXQDNFHEDPHADLV-MSKKVPKFADSNEK 450
+ S R +D +R+V DNF +DPHA L + K++P+F D +
Sbjct: 5 KTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADT 64
Query: 451 PTRKKKSKSAEYYKMRFRKTFAQLVEEDASFRSKPPNYLSAQAPPSKFPERHFCAVCGFP 630
+KKK++ +++K+RFRK F L+EE ++ PNYL+A A P P+R FCAVCGFP
Sbjct: 65 GKKKKKTRG-DHFKLRFRKNFQALLEEQNLSVAEGPNYLTACAGPPSRPQRPFCAVCGFP 123
Query: 631 SNYTCI 648
S YTC+
Sbjct: 124 SPYTCV 129
>BC048989-1|AAH48989.1| 137|Homo sapiens C18orf37 protein protein.
Length = 137
Score = 33.5 bits (73), Expect = 0.67
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 490 KMRFRKTFAQLVEEDAS--FRSKPPNYLSAQAPPSKFPERHFCAVCGFPSNYT 642
K R K Q++ + + ++ PNY S APPS P + + V G +NYT
Sbjct: 46 KNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSDVSGLLANYT 98
>BC039404-1|AAH39404.1| 192|Homo sapiens chromosome 18 open reading
frame 37 protein.
Length = 192
Score = 33.5 bits (73), Expect = 0.67
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 490 KMRFRKTFAQLVEEDAS--FRSKPPNYLSAQAPPSKFPERHFCAVCGFPSNYT 642
K R K Q++ + + ++ PNY S APPS P + + V G +NYT
Sbjct: 101 KNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSDVSGLLANYT 153
>BC061592-1|AAH61592.1| 255|Homo sapiens transmembrane protein 81
protein.
Length = 255
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 421 PSLT*LNLHVGLHESYLVLGPQLLFSLDVFS-PHHPK 314
P+L LN H L E ++ L +LD +S PHHPK
Sbjct: 183 PNLVNLNFHQSLTEDQKLIDEGLEVNLDSYSKPHHPK 219
>AY359081-1|AAQ89440.1| 255|Homo sapiens KVLA2788 protein.
Length = 255
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 421 PSLT*LNLHVGLHESYLVLGPQLLFSLDVFS-PHHPK 314
P+L LN H L E ++ L +LD +S PHHPK
Sbjct: 183 PNLVNLNFHQSLTEDQKLIDEGLEVNLDSYSKPHHPK 219
>AL583832-4|CAI15289.1| 255|Homo sapiens novel protein protein.
Length = 255
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 421 PSLT*LNLHVGLHESYLVLGPQLLFSLDVFS-PHHPK 314
P+L LN H L E ++ L +LD +S PHHPK
Sbjct: 183 PNLVNLNFHQSLTEDQKLIDEGLEVNLDSYSKPHHPK 219
>Z99572-8|CAI23064.1| 753|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 753
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 237 NKPPQCLAAQCPPLKIPER 255
>Z99572-7|CAI23063.1| 829|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 829
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 251 NKPPQCLAAQCPPLKIPER 269
>Z99572-6|CAI23062.1| 645|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 645
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 251 NKPPQCLAAQCPPLKIPER 269
>Z99572-5|CAI23058.1| 830|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 830
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>Z99572-4|CAI23060.1| 646|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 646
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>Z99572-2|CAI23059.1| 644|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 644
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>Z99572-1|CAI23061.1| 768|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 768
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>M60234-1|AAA35910.1| 830|Homo sapiens granule membrane protein-140
protein.
Length = 830
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>M25322-1|AAA35911.1| 830|Homo sapiens protein ( Human granule
membrane protein-140 mRNA, complete cds. ).
Length = 830
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>BC068533-1|AAH68533.1| 829|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 829
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>BC028067-1|AAH28067.2| 789|Homo sapiens SELP protein protein.
Length = 789
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 251 NKPPQCLAAQCPPLKIPER 269
>AL022146-8|CAI22758.1| 753|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 753
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 237 NKPPQCLAAQCPPLKIPER 255
>AL022146-7|CAI22757.1| 829|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 829
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 251 NKPPQCLAAQCPPLKIPER 269
>AL022146-6|CAI22756.1| 645|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 645
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 251 NKPPQCLAAQCPPLKIPER 269
>AL022146-5|CAI22753.1| 830|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 830
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>AL022146-4|CAI22755.1| 646|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 646
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>AL022146-2|CAI22754.1| 644|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 644
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>AL022146-1|CAI22751.1| 768|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 768
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>AF542391-1|AAN06828.1| 830|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 830
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 547 SKPPNYLSAQAPPSKFPER 603
+KPP L+AQ PP K PER
Sbjct: 252 NKPPQCLAAQCPPLKIPER 270
>AK095502-1|BAC04560.1| 197|Homo sapiens protein ( Homo sapiens
cDNA FLJ38183 fis, clone FCBBF1000155. ).
Length = 197
Score = 30.3 bits (65), Expect = 6.2
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 490 KMRFRKTFAQLVEEDAS--FRSKPPNYLSAQAPPSKFPERHFCAVCGFPSNYTCIP 651
K R K Q++ + + ++ PNY S APPS P + + V G C P
Sbjct: 101 KNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSDVSGLLEPPNCFP 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,645,404
Number of Sequences: 237096
Number of extensions: 1899003
Number of successful extensions: 8165
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 7962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8160
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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