Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18f19
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002777-1|AAH02777.1| 245|Homo sapiens exosome component 4 pro... 130 3e-30
AK000598-1|BAA91279.1| 245|Homo sapiens protein ( Homo sapiens ... 130 3e-30
AF281133-1|AAF82134.1| 245|Homo sapiens exosome component Rrp41... 130 3e-30
BC052252-1|AAH52252.1| 272|Homo sapiens exosome component 6 pro... 49 2e-05
BC107696-1|AAI07697.1| 235|Homo sapiens exosome component 5 pro... 46 1e-04
BC007742-1|AAH07742.1| 235|Homo sapiens exosome component 5 pro... 46 1e-04
AF285785-1|AAM75154.1| 268|Homo sapiens chronic myelogenous leu... 46 1e-04
AF281134-1|AAF82135.1| 235|Homo sapiens exosome component Rrp46... 46 1e-04
BC053660-1|AAH53660.1| 783|Homo sapiens polyribonucleotide nucl... 36 0.16
AY027528-1|AAK13047.1| 783|Homo sapiens 3'-5' RNA exonuclease p... 36 0.16
AK027437-1|BAB55109.1| 504|Homo sapiens protein ( Homo sapiens ... 36 0.16
AJ458465-1|CAD30289.1| 783|Homo sapiens polynucleotide phosphor... 36 0.16
AC015982-3|AAY24271.1| 783|Homo sapiens unknown protein. 36 0.16
BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8 pro... 35 0.27
AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein. 35 0.27
AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein... 35 0.27
EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein. 31 4.4
EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related... 31 4.4
EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related... 31 4.4
BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein. 31 4.4
BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein. 31 4.4
AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein. 31 4.4
AK123876-1|BAC85713.1| 428|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK026330-1|BAB15448.1| 173|Homo sapiens protein ( Homo sapiens ... 31 4.4
AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein. 31 4.4
D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein. 30 7.7
BC099654-1|AAH99654.1| 912|Homo sapiens GRID2 protein protein. 30 7.7
BC099653-1|AAH99653.1| 1007|Homo sapiens glutamate receptor, ion... 30 7.7
BC099652-1|AAH99652.1| 1007|Homo sapiens glutamate receptor, ion... 30 7.7
BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7 pro... 30 7.7
AF009014-1|AAC39579.1| 1007|Homo sapiens glutamate receptor delt... 30 7.7
AB209318-1|BAD92555.1| 1009|Homo sapiens glutamate receptor, ion... 30 7.7
>BC002777-1|AAH02777.1| 245|Homo sapiens exosome component 4
protein.
Length = 245
Score = 130 bits (315), Expect = 3e-30
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Frame = +1
Query: 283 MPAADLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQ--A 456
M +LLS QG R+DGRR ELR+I+ ++GVF Q DGSAY+EQGNTK LA VYGPH+
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 457 SKSKMSTEAVVVNCQYSMATFSTGERKNRPRGDRKSQE 570
S+++ + +VNCQYS ATFSTGERK RP GDRKS E
Sbjct: 61 SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCE 98
>AK000598-1|BAA91279.1| 245|Homo sapiens protein ( Homo sapiens
cDNA FLJ20591 fis, clone KAT09018. ).
Length = 245
Score = 130 bits (315), Expect = 3e-30
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Frame = +1
Query: 283 MPAADLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQ--A 456
M +LLS QG R+DGRR ELR+I+ ++GVF Q DGSAY+EQGNTK LA VYGPH+
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 457 SKSKMSTEAVVVNCQYSMATFSTGERKNRPRGDRKSQE 570
S+++ + +VNCQYS ATFSTGERK RP GDRKS E
Sbjct: 61 SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCE 98
>AF281133-1|AAF82134.1| 245|Homo sapiens exosome component Rrp41
protein.
Length = 245
Score = 130 bits (315), Expect = 3e-30
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Frame = +1
Query: 283 MPAADLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQ--A 456
M +LLS QG R+DGRR ELR+I+ ++GVF Q DGSAY+EQGNTK LA VYGPH+
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 457 SKSKMSTEAVVVNCQYSMATFSTGERKNRPRGDRKSQE 570
S+++ + +VNCQYS ATFSTGERK RP GDRKS E
Sbjct: 61 SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCE 98
>BC052252-1|AAH52252.1| 272|Homo sapiens exosome component 6
protein.
Length = 272
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +1
Query: 331 RRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQA 456
R P LR + + G+ +Q GSAYLE G TKVL AV GP QA
Sbjct: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQA 72
>BC107696-1|AAI07697.1| 235|Homo sapiens exosome component 5
protein.
Length = 235
Score = 45.6 bits (103), Expect = 1e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 292 ADLLSSQGLRLDGRRPN-ELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQASKSK 468
A + + G R P LR C+ + ++PDGSA QG+T VLA VYGP + SK
Sbjct: 9 AKIRAENGTGSSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSK 68
>BC007742-1|AAH07742.1| 235|Homo sapiens exosome component 5
protein.
Length = 235
Score = 45.6 bits (103), Expect = 1e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 292 ADLLSSQGLRLDGRRPN-ELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQASKSK 468
A + + G R P LR C+ + ++PDGSA QG+T VLA VYGP + SK
Sbjct: 9 AKIRAENGTGSSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSK 68
>AF285785-1|AAM75154.1| 268|Homo sapiens chronic myelogenous
leukemia tumor antigen 28 protein.
Length = 268
Score = 45.6 bits (103), Expect = 1e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 292 ADLLSSQGLRLDGRRPN-ELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQASKSK 468
A + + G R P LR C+ + ++PDGSA QG+T VLA VYGP + SK
Sbjct: 42 AKIRAENGTGSSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSK 101
>AF281134-1|AAF82135.1| 235|Homo sapiens exosome component Rrp46
protein.
Length = 235
Score = 45.6 bits (103), Expect = 1e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 292 ADLLSSQGLRLDGRRPN-ELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQASKSK 468
A + + G R P LR C+ + ++PDGSA QG+T VLA VYGP + SK
Sbjct: 9 AKIRAENGTGSSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSK 68
>BC053660-1|AAH53660.1| 783|Homo sapiens polyribonucleotide
nucleotidyltransferase 1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 319 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAV 438
R DGR LR + C++ +F GSA ++G T+VL V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTV 397
>AY027528-1|AAK13047.1| 783|Homo sapiens 3'-5' RNA exonuclease
protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 319 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAV 438
R DGR LR + C++ +F GSA ++G T+VL V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTV 397
>AK027437-1|BAB55109.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14531 fis, clone NT2RM2000371, weakly similar to
POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (EC 2.7.7.8).
).
Length = 504
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 319 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAV 438
R DGR LR + C++ +F GSA ++G T+VL V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTV 397
>AJ458465-1|CAD30289.1| 783|Homo sapiens polynucleotide
phosphorylase-like protein protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 319 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAV 438
R DGR LR + C++ +F GSA ++G T+VL V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTV 397
>AC015982-3|AAY24271.1| 783|Homo sapiens unknown protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 319 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAV 438
R DGR LR + C++ +F GSA ++G T+VL V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTV 397
>BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8
protein.
Length = 276
Score = 34.7 bits (76), Expect = 0.27
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 310 QGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQASKSKMSTEAVV 489
+ R DGR E R +G + DGSA ++ GNT V+ V A + + V
Sbjct: 20 ENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYV 79
Query: 490 V 492
V
Sbjct: 80 V 80
>AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein.
Length = 275
Score = 34.7 bits (76), Expect = 0.27
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 310 QGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQASKSKMSTEAVV 489
+ R DGR E R +G + DGSA ++ GNT V+ V A + + V
Sbjct: 20 ENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYV 79
Query: 490 V 492
V
Sbjct: 80 V 80
>AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein
OIP2 protein.
Length = 265
Score = 34.7 bits (76), Expect = 0.27
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 310 QGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQASKSKMSTEAVV 489
+ R DGR E R +G + DGSA ++ GNT V+ V A + + V
Sbjct: 18 ENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYV 77
Query: 490 V 492
V
Sbjct: 78 V 78
>EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein.
Length = 588
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 554 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 588
>EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 444
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 410 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 444
>EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 588
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 554 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 588
>BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein.
Length = 523
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 489 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 523
>BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein.
Length = 475
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 441 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 475
>AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein.
Length = 607
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 573 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 607
>AK123876-1|BAC85713.1| 428|Homo sapiens protein ( Homo sapiens
cDNA FLJ41882 fis, clone OCBBF2022351, weakly similar
to TIPD PROTEIN. ).
Length = 428
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 394 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 428
>AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14948 fis, clone PLACE2000164, weakly similar to
TIPD PROTEIN. ).
Length = 504
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 470 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 504
>AK026330-1|BAB15448.1| 173|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22677 fis, clone HSI10648. ).
Length = 173
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 139 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 173
>AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein.
Length = 523
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 TRKHESACSRV-WTPSGFKIEDVDRSCSCQLPIQY 509
+++H S+ + V W+PSG + VD+ C L QY
Sbjct: 489 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 523
>D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein.
Length = 290
Score = 29.9 bits (64), Expect = 7.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 310 QGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAV 438
+ LR+DGR + R + + V + GSA ++ G+T +L V
Sbjct: 19 EDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGV 61
>BC099654-1|AAH99654.1| 912|Homo sapiens GRID2 protein protein.
Length = 912
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 557 RSPRGRFFRSPVENVAILYWQLTTTASVDI 468
R+P G FFRSP++ ++ + +Q T T +++
Sbjct: 873 RAPNGGFFRSPIKTMSSIPYQPTPTLGLNL 902
>BC099653-1|AAH99653.1| 1007|Homo sapiens glutamate receptor,
ionotropic, delta 2 protein.
Length = 1007
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 557 RSPRGRFFRSPVENVAILYWQLTTTASVDI 468
R+P G FFRSP++ ++ + +Q T T +++
Sbjct: 968 RAPNGGFFRSPIKTMSSIPYQPTPTLGLNL 997
>BC099652-1|AAH99652.1| 1007|Homo sapiens glutamate receptor,
ionotropic, delta 2 protein.
Length = 1007
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 557 RSPRGRFFRSPVENVAILYWQLTTTASVDI 468
R+P G FFRSP++ ++ + +Q T T +++
Sbjct: 968 RAPNGGFFRSPIKTMSSIPYQPTPTLGLNL 997
>BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7
protein.
Length = 291
Score = 29.9 bits (64), Expect = 7.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 310 QGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAV 438
+ LR+DGR + R + + V + GSA ++ G+T +L V
Sbjct: 20 EDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGV 62
>AF009014-1|AAC39579.1| 1007|Homo sapiens glutamate receptor delta-2
subunit protein.
Length = 1007
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 557 RSPRGRFFRSPVENVAILYWQLTTTASVDI 468
R+P G FFRSP++ ++ + +Q T T +++
Sbjct: 968 RAPNGGFFRSPIKTMSSIPYQPTPTLGLNL 997
>AB209318-1|BAD92555.1| 1009|Homo sapiens glutamate receptor,
ionotropic, delta 2 variant protein.
Length = 1009
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 557 RSPRGRFFRSPVENVAILYWQLTTTASVDI 468
R+P G FFRSP++ ++ + +Q T T +++
Sbjct: 970 RAPNGGFFRSPIKTMSSIPYQPTPTLGLNL 999
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,052,827
Number of Sequences: 237096
Number of extensions: 1614089
Number of successful extensions: 6772
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 6693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6769
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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