Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18f10
(671 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 50 2e-06
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 49 4e-06
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 43 2e-04
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 42 3e-04
11_01_0557 + 4394754-4396040 36 0.039
03_06_0273 + 32787021-32787434,32788096-32788221,32788305-327883... 33 0.21
03_05_0493 + 24879554-24879674,24880272-24880339,24880761-24880811 32 0.36
12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106 31 1.1
11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162... 30 1.5
12_02_0321 - 17508536-17508657,17508939-17509191 30 1.9
04_01_0403 + 5283830-5284106,5284996-5285179,5285801-5286015,528... 30 1.9
08_01_0102 - 735359-735370,735371-735455,735531-735616,735697-73... 29 3.4
06_01_0768 + 5742938-5743196,5743291-5744729 29 3.4
11_01_0211 - 1660249-1660352,1660504-1660547,1660893-1660934,166... 28 5.9
09_04_0116 + 14805972-14806511,14807095-14807232,14809906-14810352 28 5.9
11_03_0131 + 10497674-10499617 28 7.8
07_03_1562 - 27738369-27738568,27738767-27738962,27739079-277392... 28 7.8
02_01_0462 + 3332464-3332470,3333606-3335806 28 7.8
02_01_0460 + 3323236-3323950,3325087-3326025,3326104-3326723 28 7.8
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Frame = +1
Query: 223 WDDMKMAVIFSAYHIGYCICFPIFHNLGDRLGPKWVVVIAGLSSGVLSCLTPASAYYDFW 402
W + +I S++ GY + + DR G K V+ + + + LTP +A
Sbjct: 215 WSPATVGLIQSSFFWGYLLTQILGGIWADRFGGKVVLGFGVVWWSIATVLTPLAAKIGLP 274
Query: 403 ALFVVRTIEGFCSGAMQPSMVQVLRHWVPPTERNNFL-----WAHCGVTTGTCFTFLMCA 567
L V+R G G P+M +L WVP +ER+ L + G TG F+ L+ +
Sbjct: 275 FLLVMRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIS 334
Query: 568 AIQYYSRWPVGFY 606
WP FY
Sbjct: 335 RF----GWPSVFY 343
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Frame = +1
Query: 223 WDDMKMAVIFSAYHIGYCICFPIFHNLGDRLGPKWVVVIAGLSSGVLSCLTPASAYYDFW 402
W+ + +I S++ GY + D +G K V+ + + + LTP +A
Sbjct: 153 WNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVIWWSIATALTPFAAKLGLP 212
Query: 403 ALFVVRTIEGFCSGAMQPSMVQVLRHWVPPTERNNFL-WAHCGVTTGTCFTFLMCAAIQY 579
L V R G G P+M +L WVP +ER+ L + G+ G+ + +
Sbjct: 213 FLLVTRAFMGVGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIH 272
Query: 580 YSRWPVGFY 606
WP FY
Sbjct: 273 NFGWPSVFY 281
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = +1
Query: 223 WDDMKMAVIFSAYHIGYCICFPIFHNLGDRLGPKWVVVIAGLSSGVLSCLTPASAYYDFW 402
W + ++ S++ GY + L DR G K V+ A + + LTP +A
Sbjct: 156 WSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGAAALWSLATFLTPWAASQSTI 215
Query: 403 ALFVVRTIEGFCSGAMQPSMVQVLRHWVPPTER 501
L +R + G G P+M L W P ER
Sbjct: 216 MLLAIRALFGLAEGVAFPTMSTFLPKWFPTHER 248
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Frame = +1
Query: 223 WDDMKMAVIFSAYHIGYCICFPIFHNLGDRLGPKWVVVIAGLSSGVLSCLTPASAYYDFW 402
W V+ S++ GY + I L D G K V+ + + L+P +A W
Sbjct: 131 WTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATFLSPWAAARSLW 190
Query: 403 ALFVVRTIEGFCSGAMQPSMVQVLRHWVPPTERNNFLW-AHCGVTTGTCFTFLMCAAI 573
R + G G PSM ++ W P TER++ + A G G L+ I
Sbjct: 191 LFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSAVGIAMAGFQLGNTIGLLLSPII 248
>11_01_0557 + 4394754-4396040
Length = 428
Score = 35.5 bits (78), Expect = 0.039
Identities = 24/98 (24%), Positives = 43/98 (43%)
Frame = +1
Query: 211 DMMNWDDMKMAVIFSAYHIGYCICFPIFHNLGDRLGPKWVVVIAGLSSGVLSCLTPASAY 390
D + + +I S ++ GY + RLG + V++++ + + + P
Sbjct: 36 DAVGTNQANKGMILSMFYYGYVLSQIPGGWAAQRLGGRLVLLLSFVLWSSICAVVPLDPN 95
Query: 391 YDFWALFVVRTIEGFCSGAMQPSMVQVLRHWVPPTERN 504
L + R + G G + PS+ VL WVPP ER+
Sbjct: 96 RVI-LLVLSRLLVGVAQGLIFPSIHTVLAQWVPPQERS 132
>03_06_0273 +
32787021-32787434,32788096-32788221,32788305-32788378,
32788468-32788537,32788622-32788677,32788762-32788833,
32788945-32789039,32789196-32789262,32789359-32789488,
32789578-32789793,32789887-32790017,32790719-32790893,
32790977-32791067,32792151-32792308,32792763-32792951,
32793066-32793125
Length = 707
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 361 LSCLTPASAYYDFWALFVVRTIEGFCSGAMQPSMVQVLRHWV-PPTERNNFLWAHCGVTT 537
+SC++ ++ +FWAL ++ GFCS + S V + + W+ E+N ++ A G T
Sbjct: 508 ISCVSSSA---NFWAL-IMDAGTGFCSQVYELSQVFLHKDWIMEQWEKNYYITAIAGATN 563
Query: 538 GT 543
G+
Sbjct: 564 GS 565
>03_05_0493 + 24879554-24879674,24880272-24880339,24880761-24880811
Length = 79
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 8/40 (20%)
Frame = +3
Query: 249 FFCLPYWLLHLL--------SNLP*PWR*TWTQMGSCNSW 344
FFC +WLL LL S+LP W W +GS N+W
Sbjct: 8 FFCAKWWLLPLLLLDHTLSSSSLPTSWG-VWANLGSINTW 46
>12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106
Length = 427
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 310 RLGPKWVVVIAGLSSGVLSCLTPASAYYDFWALFVVRTIEGFCSGAMQPSMVQVLRHWVP 489
R+G + V++++ + ++ L P + L + R G G + P++ VL WVP
Sbjct: 63 RIGGRRVLLLSFVLWSLICGLIPLDPKREV-ILVLSRLFVGVAQGFIFPAIHTVLAQWVP 121
Query: 490 PTERN 504
P ER+
Sbjct: 122 PQERS 126
>11_01_0207 -
1620192-1620280,1620408-1620451,1620703-1620791,
1620870-1620914,1621441-1621548,1621638-1621723,
1622202-1622289,1622403-1622576,1623084-1623159,
1623256-1623305,1623392-1623454,1623689-1623791,
1623871-1623973,1624679-1624739,1624864-1624904,
1625076-1625154
Length = 432
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 253 SAYHIGYCICFPIFHNLGDRLGPKWVVVIAGLSSGVLSCLTPASAYYDFWALFVVRTIEG 432
++Y IG C + + DR+G K ++ + LS + + L S Y W R + G
Sbjct: 62 ASYMIGRCFASLFWGVVADRIGRKPIIKFSILSVVIFNTLFGLSVKY--WMAIATRFLLG 119
Query: 433 FCSGAMQPSMV 465
+G + P V
Sbjct: 120 ALNGMLAPIKV 130
>12_02_0321 - 17508536-17508657,17508939-17509191
Length = 124
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 313 LGPK---WVVVIAGLSSGVLSCLTPASAYYDFWALFVVRTIEGFCSGAMQPSMVQVLRHW 483
LGP+ W +I + G L CL + +WA+ VR + F G + V W
Sbjct: 41 LGPRVWIWTTLIGVVEIGPLGCLLASIGLMGYWAILFVRFVGLFGRGEEWGAGAPVAGRW 100
>04_01_0403 +
5283830-5284106,5284996-5285179,5285801-5286015,
5286616-5286736,5286862-5286974,5287823-5288055,
5288717-5288832,5288949-5289047,5289512-5289691,
5289816-5289903,5289999-5290208,5290599-5290820
Length = 685
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +1
Query: 202 GVIDMMNWDDM-KMAVIFSAYHIGYCICFPIFHNLGDRLGPKWVVVIAGLSSGVLSCLTP 378
G++D+ +W+ + K+ + ++H F GD+ +++ I +G + C+ P
Sbjct: 173 GMVDL-DWEKLLKLRCLDGSFHCSPASTATAFQQTGDQKCFEYLDGIVKKFNGGVPCIYP 231
Query: 379 ASAYYDFWAL--FVVRTIEGFCSGAMQPSMVQVLRHWVP 489
Y WA+ I + ++ + + R+W P
Sbjct: 232 LDVYERLWAVDRLTRLGISRHFTSEIEDCLDYIFRNWTP 270
>08_01_0102 -
735359-735370,735371-735455,735531-735616,735697-735779,
736790-737048,737132-737300,738554-738698,738782-739004
Length = 353
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +1
Query: 331 VVIAGLSSGVLSCLTPASAYYDFWALFVVRTIEGFCSGAMQPSMVQVLRHWVPPTERNNF 510
+ IA ++ G+ + A Y D L ++ I C G + PS+ ++ ++P R
Sbjct: 274 LTIAYVTVGIALSIV-AYDYQDIGTLVILFCIFHACVGFILPSLARLRTMYLPNELRGGM 332
Query: 511 LWAHCGVTTGTCFTFLM 561
+ G+ F FLM
Sbjct: 333 MSFSLGLANAAIFIFLM 349
>06_01_0768 + 5742938-5743196,5743291-5744729
Length = 565
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 177 YWEAKSKIGSHRHDELG*YENGCDFFCL-PY 266
YW A ++GS R+ G + GC + L PY
Sbjct: 149 YWRAAERLGSRRNGTAGADDEGCKYLVLVPY 179
>11_01_0211 -
1660249-1660352,1660504-1660547,1660893-1660934,
1661010-1661098,1661181-1661225,1661501-1661545,
1661574-1661681,1661765-1661850,1662253-1662340,
1662884-1663084,1663491-1663566,1663652-1663701,
1663783-1663845,1663924-1663977,1664093-1664195,
1664328-1664430,1664516-1664576,1664872-1664912,
1666605-1666761
Length = 519
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +1
Query: 253 SAYHIGYCICFPIFHNLGDRLGPKWVVVIAGLSSGVLSCLTPASAYYDFWALFVVRTIEG 432
+++ G C+ I+ DR+G K VVV + + + L S + +W R + G
Sbjct: 88 ASFMFGRCLTSTIWGIAADRIGRKPVVVFGIFAVVIFNTLFGLS--FTYWMAIATRFLLG 145
Query: 433 FCSGAMQP 456
+G + P
Sbjct: 146 ALNGLLGP 153
>09_04_0116 + 14805972-14806511,14807095-14807232,14809906-14810352
Length = 374
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 558 NVRCNTILFSMACWFLHRRRTP 623
++ +++ FS+ CWFL RRR P
Sbjct: 211 DLELDSLSFSVFCWFLCRRRRP 232
>11_03_0131 + 10497674-10499617
Length = 647
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 400 KSHSMLKQE*DNLTLPMIAQLLQLPIWVQVY 308
+ ++L E D LT P L +PIWV++Y
Sbjct: 327 RGDALLVAEFDGLTCPSKILLNSVPIWVRIY 357
>07_03_1562 -
27738369-27738568,27738767-27738962,27739079-27739230,
27739775-27739832,27739923-27740038,27740117-27740237,
27740348-27740635,27740817-27740987,27741091-27741741,
27742515-27742676,27742764-27743904,27743992-27744152,
27744239-27744564,27745678-27745825
Length = 1296
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 543 LFHVFNVRCNTILFSMAC 596
LFH+FN+ C+ L+S+ C
Sbjct: 921 LFHLFNMMCSRYLYSIKC 938
>02_01_0462 + 3332464-3332470,3333606-3335806
Length = 735
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 511 LWAHCGVTTGTCF-TFLMCAAIQYYSRWPVGFY 606
LW +C VT G F +L A+ + + W + F+
Sbjct: 690 LWLYCSVTAGAVFGVWLWFGALFFCNAWRLAFF 722
>02_01_0460 + 3323236-3323950,3325087-3326025,3326104-3326723
Length = 757
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 511 LWAHCGVTTGTCF-TFLMCAAIQYYSRWPVGFY 606
LW +C VT G F +L A+ + + W + F+
Sbjct: 714 LWLYCSVTAGAVFGVWLWFGALFFCNAWRLAFF 746
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,298,533
Number of Sequences: 37544
Number of extensions: 385702
Number of successful extensions: 789
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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