Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18e20
(606 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0051 + 14489255-14490403 39 0.004
10_08_0052 - 14491990-14493108 36 0.025
10_08_0071 - 14652607-14653716 35 0.057
06_01_0465 - 3304417-3306834 35 0.057
10_08_0054 + 14501357-14502478 33 0.18
06_01_0868 - 6606913-6607000,6607516-6608010,6610313-6610761,661... 31 0.71
04_03_0061 + 10527159-10527866 31 0.94
11_06_0431 - 23424969-23426081 30 1.6
07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644 30 1.6
03_02_0775 - 11096620-11097240 29 2.2
02_05_0040 + 25341418-25341810 29 2.2
11_06_0462 + 23871596-23872150 29 3.8
12_01_0835 + 7794487-7794580,7796188-7796291,7796619-7797112,779... 28 5.0
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 28 5.0
06_03_1080 + 27436389-27436742,27437573-27437804,27437911-274381... 28 5.0
10_08_0055 - 14505747-14506934 28 6.6
09_01_0013 - 355103-355435 28 6.6
07_03_0411 + 17849061-17849436,17849514-17849776,17850491-17851081 28 6.6
07_01_0672 - 5041742-5043175 28 6.6
04_03_0639 + 18247768-18248196 28 6.6
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187... 28 6.6
10_08_0124 + 14992399-14993478 27 8.7
06_01_0048 + 436156-436406,436514-436693,436725-437133 27 8.7
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 27 8.7
03_02_0126 - 5769476-5770600 27 8.7
02_02_0615 - 12152941-12153726 27 8.7
>10_08_0051 + 14489255-14490403
Length = 382
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/132 (25%), Positives = 59/132 (44%)
Frame = +3
Query: 129 KCKDGVELVSPAFYTSQYGYKLQASLFLNGNGAGESTHMSVYIKILPGEYDALLRWPFAH 308
K G + S +F + ++L S F N G+ + ++SVY+ ++ G+ P
Sbjct: 48 KLPSGKFIQSRSFKVGDHQWRL--SYFPNVKGSDYADYISVYLCLVEGQ-------PVKA 98
Query: 309 TVSFTLFDQSSSPDRACNIVESFVPDPTWKNFQRPSKEPDALGFGFPRFVSHEMLKKRNF 488
+F+L D++ P A + D F +GFG+ +F+ E+L+K
Sbjct: 99 RATFSLLDRAGQPAPAS--ASYYTRDMPMGRFAVSD-----IGFGYHQFIKRELLEKSGH 151
Query: 489 VKDDIMFLRVKV 524
V+DD +R V
Sbjct: 152 VRDDGFAIRCDV 163
>10_08_0052 - 14491990-14493108
Length = 372
Score = 35.9 bits (79), Expect = 0.025
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +3
Query: 129 KCKDGVELVSPAFYTSQYGYKLQASLFLNG-NGAGESTHMSVYIKILPGEYDALLRWPFA 305
K +G ++S +F + ++L S F NG N G++ +SV++ ++ G+ P
Sbjct: 47 KLPNGKYILSSSFKVGDHQWQL--SYFPNGVNRYGDADFVSVFLYLVEGQ-------PVK 97
Query: 306 HTVSFTLFDQSSSPDRACNIVESFVPDPTWKNFQRPSKEPDALGFGFPRFVSHEMLKKRN 485
+F+L D++ P V S+ D ++F GFG F+ ++L+K
Sbjct: 98 ARATFSLLDRAGKP------VPSYTRDTGMRDFAVGGS-----GFGPGDFIKRKLLEKSG 146
Query: 486 FVKDDIMFLRVKV 524
V+DD +R V
Sbjct: 147 HVRDDGFAIRCDV 159
>10_08_0071 - 14652607-14653716
Length = 369
Score = 34.7 bits (76), Expect = 0.057
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 366 VESFVPDPTWKNFQRPSKEPDALG-FGFPRFVSHEMLKKRNFVKDDIMFLRVKV 524
VE P WK + +K+ + +G+P+F+ E L+K +++DD +R +
Sbjct: 102 VEKQAPSLAWKTVRAFNKQTSSSSSWGYPKFIRREDLEKSEYLRDDSFTIRCDI 155
>06_01_0465 - 3304417-3306834
Length = 805
Score = 34.7 bits (76), Expect = 0.057
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 132 CKDGVELVSPAFYTSQYGYKLQASLFLNGNGAGESTHMSVYIKI 263
C +G E+V P ++ YK A+L N N +S H ++ KI
Sbjct: 311 CLEGFEMVKPGDWSQGCSYKANATLIWNNNANSKSNHGFIFKKI 354
>10_08_0054 + 14501357-14502478
Length = 373
Score = 33.1 bits (72), Expect = 0.18
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +3
Query: 171 TSQYGYKLQASLFL-NGNGAGESTHMSVYIKILPGEYDALLRWPFAHTVSFTLFDQSSSP 347
T + G L LF NG+ A ++VY+K++ A + P +F L D+ P
Sbjct: 56 TFKVGDHLWCLLFYHNGSRASPPGFVAVYLKLVV----AGGKQPVRARATFGLLDRLGKP 111
Query: 348 DRACNIVESFVPDPTWKNFQRPSKEPDALGFGFPRFVSHEMLKKRNFVKDDIMFLRVKV 524
+C + D F GFG+ F+ E+L+K +V+DD +R V
Sbjct: 112 MMSCKL------DAGMHGFT-----VSETGFGYHEFIGAEVLEKLGYVRDDSFTIRCDV 159
>06_01_0868 -
6606913-6607000,6607516-6608010,6610313-6610761,
6610863-6610979,6611892-6612863
Length = 706
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 PHVGLHQDTARRVRRFAPLAIRPHCLLHSLRPELQPG-PSLQH 364
PH+ Q R + PL I P + H+L P P P +QH
Sbjct: 444 PHIHYQQTLVARESQRVPLDIEPRLVPHALEPRHGPSIPEIQH 486
>04_03_0061 + 10527159-10527866
Length = 235
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 441 GFPRFVSHEMLKKRNFVKDDIMFLRVKV 524
GF RFVS E L KR FVK D +R V
Sbjct: 145 GFERFVSREDLGKRGFVKADRFQIRCDV 172
>11_06_0431 - 23424969-23426081
Length = 370
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 438 FGFPRFVSHEMLKKRNFVKDDIMFLRVKV 524
+GFPRFV + L++ +++DD LR V
Sbjct: 140 WGFPRFVERKTLEESPYLRDDSFVLRCDV 168
>07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644
Length = 395
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 438 FGFPRFVSHEMLKKRNFVKDDIMFLRVKVDPSKNR 542
+G+ RF +L+ +F+KDD + + V KNR
Sbjct: 122 WGYKRFYRRSLLESSDFLKDDCLVMNCTVGVVKNR 156
>03_02_0775 - 11096620-11097240
Length = 206
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 1 GQSRRGRRGSWTRCGRR 51
G RRGRRG W RCGRR
Sbjct: 138 GAWRRGRRGPW-RCGRR 153
>02_05_0040 + 25341418-25341810
Length = 130
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 7/53 (13%)
Frame = +1
Query: 1 GQSRRGRRGSWTRCGRRSRAC-----RSTAPARSSGGS--RTGPPRWPRPSVR 138
G RR R RCG R C R AP R G R G PRW S R
Sbjct: 69 GVPRRRRAAPRRRCGGSKRRCSGPQRRRGAPRRRCSGPQLRCGAPRWRHGSSR 121
>11_06_0462 + 23871596-23872150
Length = 184
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 438 FGFPRFVSHEMLKKRNFVKDDIMFLRVKVDPSKNRCC 548
+GF F++ E L++ +++DD ++ VD + R C
Sbjct: 128 WGFKDFIAREELERSEYLRDDCFAIQCDVDVTTVRKC 164
>12_01_0835 +
7794487-7794580,7796188-7796291,7796619-7797112,
7797219-7797358,7797516-7797817,7798312-7798578
Length = 466
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 173 GVEGGGDQLDAVLTLGLGHLGGPVRDP 93
G GGGD+ A + H+GGP R P
Sbjct: 257 GDPGGGDEDSAAADPDMAHVGGPWRPP 283
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 10 RRGRRGSWTRCGRRSRACRSTAPARSSGGSR-TGPPRWPR 126
RRGRRG+ R R R CR R++GG+ + R PR
Sbjct: 661 RRGRRGAGARPAARGR-CRRGRRGRAAGGATVSAEARAPR 699
>06_03_1080 +
27436389-27436742,27437573-27437804,27437911-27438159,
27438467-27438517,27438676-27438936,27439019-27439071,
27439201-27439315,27441666-27441920,27442423-27443480
Length = 875
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 213 NGNGAGESTHMSVYIKILPGEYDALLRWPFAHTVSFTLFDQSSSPDRACNIVESFVPDPT 392
+G G GE + +K L E +A + + HT F S+ A N+V F+
Sbjct: 793 DGGGGGEEEEEAAEVKELMEEKEAGVSYMIGHTCVFAHESSSAVKKFAVNVVYGFLR--- 849
Query: 393 WKNFQRPS 416
+N +RP+
Sbjct: 850 -RNSRRPA 856
>10_08_0055 - 14505747-14506934
Length = 395
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 429 ALGFGFPRFVSHEMLKKRNFVKDDIMFLRVKV 524
A GFGF RF+ L++ +K+D +R V
Sbjct: 125 ATGFGFGRFIERSYLEQSEHLKNDRFAIRCDV 156
>09_01_0013 - 355103-355435
Length = 110
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 1 GQSRRGRRGSWTRCGRRSRACRSTAPARSSGGSRTGPPRWPRPSVR 138
G + GRR R R A + A ++GG R PRW RP R
Sbjct: 4 GDAAGGRRVRRPRTAIRLEAAEAGARGGAAGGRRAWRPRW-RPQRR 48
>07_03_0411 + 17849061-17849436,17849514-17849776,17850491-17851081
Length = 409
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 13 RGRRGSWTRCGRRSRACRSTAPARSSGGSRTGPPRWPRPSVR 138
R RG+ + G ++ +TAPA +S GS PP PS R
Sbjct: 37 RAARGN-KQAGAATKREEATAPAITSTGSSQSPPPEVEPSTR 77
>07_01_0672 - 5041742-5043175
Length = 477
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 37 RCGRRSRACRSTAPARSSGGSR 102
RC RR+R+ R+ AR GG R
Sbjct: 75 RCARRARSLRAERAARDGGGDR 96
>04_03_0639 + 18247768-18248196
Length = 142
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +1
Query: 1 GQSRRGRRGSWTRCGRRSRACRSTAPARSSGGSRTGPPRWPRPS 132
G + RGR + R GRR A RS APA + WP P+
Sbjct: 10 GAASRGRLAAAAR-GRRGVAWRSGAPAVGREATMLARCGWPAPA 52
>03_02_0981 +
12917195-12917572,12917661-12917818,12918732-12918765,
12918942-12919074,12919167-12919221,12919281-12920064,
12920440-12920769,12920788-12920895,12921259-12921678,
12921775-12921847,12922291-12922376,12922873-12922992,
12923086-12923156,12923350-12923449
Length = 949
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 207 FLNGNGAGESTHMSVYIKILPGEYDALLR 293
FL+ GES M+ I+ LP ++DA L+
Sbjct: 862 FLSPESLGESARMAQEIRCLPNDHDAKLK 890
>10_08_0124 + 14992399-14993478
Length = 359
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 348 DRACNIVESFVPDPTWKNFQRPSKEPDALGFGFPRFVSHEMLKKRNFVKDDIMFLRVKV 524
DR N V S T NF P+ GF F+ + L++ ++ DD + V++
Sbjct: 103 DRHRNPVRSHTITTTLYNFSVPNSS----ALGFENFIRRDELQRSEYLNDDCFAIAVRL 157
>06_01_0048 + 436156-436406,436514-436693,436725-437133
Length = 279
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +1
Query: 1 GQSRRGRRGSWTRCGRRSRACRSTAPARSSG-----GSRTGPPR 117
G G RG+ TR GRR R + A AR GSR PPR
Sbjct: 40 GAGGGGGRGAATRQGRRRRHDEAAATARRRDGDDLHGSRRRPPR 83
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 418 FEGRWKFFHVGSGTNDSTMLQARSG 344
FE W ++ SGT+D+T + SG
Sbjct: 140 FEAAWALTNIASGTSDNTKVVVESG 164
>03_02_0126 - 5769476-5770600
Length = 374
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +1
Query: 25 GSWT-RCGRRSRACR-STAPARSSGGSRTGPPRW 120
G W+ GRR R C R GG PP W
Sbjct: 249 GLWSGHSGRRGRVCSCDVVDPRGGGGGEQPPPAW 282
>02_02_0615 - 12152941-12153726
Length = 261
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 435 GFGFPRFVSHEMLKKRNFVKDDIMFLRVKVDPSKNRC 545
G+G+P F+ + LK ++DD +R V K C
Sbjct: 117 GWGYPMFIKSKDLKASESLRDDSFSIRCDVTVMKPIC 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,295,743
Number of Sequences: 37544
Number of extensions: 390570
Number of successful extensions: 1663
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1661
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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