Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18e19
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017884-1|AAH17884.1| 134|Homo sapiens Unknown (protein for IM... 75 2e-13
X95592-1|CAA64845.1| 141|Homo sapiens C1D protein protein. 74 5e-13
BC016284-1|AAH16284.1| 141|Homo sapiens nuclear DNA-binding pro... 74 5e-13
BC009589-1|AAH09589.1| 141|Homo sapiens nuclear DNA-binding pro... 74 5e-13
BC009584-1|AAH09584.1| 141|Homo sapiens nuclear DNA-binding pro... 74 5e-13
BC005235-1|AAH05235.1| 141|Homo sapiens nuclear DNA-binding pro... 74 5e-13
AC079112-1|AAX88887.1| 141|Homo sapiens unknown protein. 74 5e-13
>BC017884-1|AAH17884.1| 134|Homo sapiens Unknown (protein for
IMAGE:4295997) protein.
Length = 134
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Frame = +1
Query: 145 ENLI-EVQQVLDKLLPLKKN--YDKMSLPAQIELDLFFVYTLNSLHWIHLRTKGIDPTKH 315
EN I V ++L ++ + +N K+ Q ++DL YTLNS+ W++L T+G++P +H
Sbjct: 22 ENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEH 81
Query: 316 PIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYDHQRAPVKQ 468
P+K EL RI+ M + +E+ D++K ++ A R V+N L++ ++ K+
Sbjct: 82 PVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWEPKKKKKKK 132
>X95592-1|CAA64845.1| 141|Homo sapiens C1D protein protein.
Length = 141
Score = 73.7 bits (173), Expect = 5e-13
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = +1
Query: 145 ENLI-EVQQVLDKLLPLKKN--YDKMSLPAQIELDLFFVYTLNSLHWIHLRTKGIDPTKH 315
EN I V ++L ++ + +N K+ Q ++DL YTLNS+ W++L T+G++P +H
Sbjct: 22 ENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEH 81
Query: 316 PIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYD 444
P+K EL RI+ M + +E+ D++K ++ A R V+N L++
Sbjct: 82 PVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
>BC016284-1|AAH16284.1| 141|Homo sapiens nuclear DNA-binding
protein protein.
Length = 141
Score = 73.7 bits (173), Expect = 5e-13
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = +1
Query: 145 ENLI-EVQQVLDKLLPLKKN--YDKMSLPAQIELDLFFVYTLNSLHWIHLRTKGIDPTKH 315
EN I V ++L ++ + +N K+ Q ++DL YTLNS+ W++L T+G++P +H
Sbjct: 22 ENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEH 81
Query: 316 PIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYD 444
P+K EL RI+ M + +E+ D++K ++ A R V+N L++
Sbjct: 82 PVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
>BC009589-1|AAH09589.1| 141|Homo sapiens nuclear DNA-binding
protein protein.
Length = 141
Score = 73.7 bits (173), Expect = 5e-13
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = +1
Query: 145 ENLI-EVQQVLDKLLPLKKN--YDKMSLPAQIELDLFFVYTLNSLHWIHLRTKGIDPTKH 315
EN I V ++L ++ + +N K+ Q ++DL YTLNS+ W++L T+G++P +H
Sbjct: 22 ENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEH 81
Query: 316 PIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYD 444
P+K EL RI+ M + +E+ D++K ++ A R V+N L++
Sbjct: 82 PVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
>BC009584-1|AAH09584.1| 141|Homo sapiens nuclear DNA-binding
protein protein.
Length = 141
Score = 73.7 bits (173), Expect = 5e-13
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = +1
Query: 145 ENLI-EVQQVLDKLLPLKKN--YDKMSLPAQIELDLFFVYTLNSLHWIHLRTKGIDPTKH 315
EN I V ++L ++ + +N K+ Q ++DL YTLNS+ W++L T+G++P +H
Sbjct: 22 ENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEH 81
Query: 316 PIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYD 444
P+K EL RI+ M + +E+ D++K ++ A R V+N L++
Sbjct: 82 PVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
>BC005235-1|AAH05235.1| 141|Homo sapiens nuclear DNA-binding
protein protein.
Length = 141
Score = 73.7 bits (173), Expect = 5e-13
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = +1
Query: 145 ENLI-EVQQVLDKLLPLKKN--YDKMSLPAQIELDLFFVYTLNSLHWIHLRTKGIDPTKH 315
EN I V ++L ++ + +N K+ Q ++DL YTLNS+ W++L T+G++P +H
Sbjct: 22 ENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEH 81
Query: 316 PIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYD 444
P+K EL RI+ M + +E+ D++K ++ A R V+N L++
Sbjct: 82 PVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
>AC079112-1|AAX88887.1| 141|Homo sapiens unknown protein.
Length = 141
Score = 73.7 bits (173), Expect = 5e-13
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = +1
Query: 145 ENLI-EVQQVLDKLLPLKKN--YDKMSLPAQIELDLFFVYTLNSLHWIHLRTKGIDPTKH 315
EN I V ++L ++ + +N K+ Q ++DL YTLNS+ W++L T+G++P +H
Sbjct: 22 ENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEH 81
Query: 316 PIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYD 444
P+K EL RI+ M + +E+ D++K ++ A R V+N L++
Sbjct: 82 PVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,064,200
Number of Sequences: 237096
Number of extensions: 1524784
Number of successful extensions: 2706
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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