Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18e19
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098995-5|AAC67482.1| 477|Caenorhabditis elegans Hypothetical ... 31 0.92
AL110484-20|CAB54412.1| 195|Caenorhabditis elegans Hypothetical... 28 4.9
AF100675-2|AAC69004.1| 451|Caenorhabditis elegans Hypothetical ... 28 4.9
Z22173-1|CAA80125.1| 398|Caenorhabditis elegans Hypothetical pr... 28 6.5
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 6.5
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 27 8.6
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 27 8.6
AC024882-13|AAF60926.1| 342|Caenorhabditis elegans Seven tm rec... 27 8.6
>AF098995-5|AAC67482.1| 477|Caenorhabditis elegans Hypothetical
protein F58E1.4 protein.
Length = 477
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3
Query: 462 HGSPLMVVQTIPY*TFRHFNVNGGSFLAILHFLPL*HCSFYSEQFIF 322
H +P M +P F + N+ GG F+A L C Y E F+F
Sbjct: 255 HDNPNMTTLGLPKLNFLYDNLAGGQFVANFENLHPDFCVTYGEMFLF 301
>AL110484-20|CAB54412.1| 195|Caenorhabditis elegans Hypothetical
protein Y38E10A.20 protein.
Length = 195
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 331 LLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYDHQ 450
L+R +AT +W++V++R K V + + R + HQ
Sbjct: 71 LIRREATKARWEQVRERLKLSRVKISMRDRKRKASKSSHQ 110
>AF100675-2|AAC69004.1| 451|Caenorhabditis elegans Hypothetical
protein Y55H10A.1 protein.
Length = 451
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/66 (30%), Positives = 25/66 (37%)
Frame = +1
Query: 115 DFVNNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVYTLNSLHWIHLRTK 294
DF+ + EN I Q K K DK+ DLF + LN +L
Sbjct: 254 DFIFKIHLTLENDITGMQGTSKKAFTMKKGDKIDFDLTFTGDLFGYWALNKASASNLAIS 313
Query: 295 GIDPTK 312
G DP K
Sbjct: 314 GYDPYK 319
>Z22173-1|CAA80125.1| 398|Caenorhabditis elegans Hypothetical
protein C15H7.3 protein.
Length = 398
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 289 TKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLY 441
T +D K KD+ K K +E K+ K P E AKR+V NG +
Sbjct: 73 TTRMDDQKDEKKDDKKEEKKEERK-EEKKEEVKEPWSEEEPAKRMVANGFF 122
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 97 ELAKDKDFVNN-VENLKENLIEVQQVLDKLLPLKK 198
+L DK V+ + NL+E L+E+Q DKLL K+
Sbjct: 967 KLLLDKTNVDQRLRNLEERLVELQDAYDKLLKEKR 1001
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 109 DKDFVNNVENLKENLIEVQQVLDKLL 186
+K+ ++ VENLK + ++QQ DKL+
Sbjct: 1368 NKELIHVVENLKSQMGQIQQDRDKLM 1393
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 79 WDFKYGELAKDKDFVNN 129
WDF G+L K+ FVNN
Sbjct: 1949 WDFNQGDLPKEAVFVNN 1965
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 79 WDFKYGELAKDKDFVNN 129
WDF G+L K+ FVNN
Sbjct: 1949 WDFNQGDLPKEAVFVNN 1965
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 79 WDFKYGELAKDKDFVNN 129
WDF G+L K+ FVNN
Sbjct: 1949 WDFNQGDLPKEAVFVNN 1965
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 79 WDFKYGELAKDKDFVNN 129
WDF G+L K+ FVNN
Sbjct: 1949 WDFNQGDLPKEAVFVNN 1965
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 313 HPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYDHQR-APVKQLNKRIKF 489
+PIK E L++ K + +DRQ P +A R++R+ + R +++ KR+
Sbjct: 82 NPIKPEPLKVSFNHYKRRSQRDRQIHPN---HMASRILRDMMARQGRHITIEEAEKRLMD 138
Query: 490 SDNEE 504
D EE
Sbjct: 139 VDFEE 143
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 79 WDFKYGELAKDKDFVNN 129
WDF G+L K+ FVNN
Sbjct: 1949 WDFNQGDLPKEAVFVNN 1965
>AC024882-13|AAF60926.1| 342|Caenorhabditis elegans Seven tm
receptor protein 164 protein.
Length = 342
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = -1
Query: 563 FLKNTKIVKNYR*LILSTNYSSLSENFIRLFSCFTGAL*WSYRPFRTKRFATSTLTVGLF 384
FL T+ +Y + +NY+ EN + GAL WS R + STL +
Sbjct: 153 FLSPTQETTDYVRESIMSNYNLSMENVT-----YVGALYWSQRGNGKEEIVMSTLIATIV 207
Query: 383 WRSFTSCHFNIVAF 342
+ + + F++V +
Sbjct: 208 FTAMITSSFSVVCY 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,953,519
Number of Sequences: 27780
Number of extensions: 265363
Number of successful extensions: 726
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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