Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18e17
(614 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U60666-1|AAB02976.1| 463|Homo sapiens testis specific leucine r... 76 9e-14
BC047286-1|AAH47286.1| 466|Homo sapiens leucine rich repeat con... 76 9e-14
BC027589-1|AAH27589.1| 411|Homo sapiens LRRC6 protein protein. 76 9e-14
BC089415-1|AAH89415.1| 446|Homo sapiens CEP110 protein protein. 31 2.4
AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110... 31 2.4
AL137068-1|CAI12355.1| 452|Homo sapiens centrosomal protein 110... 31 2.4
AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein. 31 2.4
BC035937-1|AAH35937.1| 542|Homo sapiens leucine rich repeat con... 29 9.9
BC016439-1|AAH16439.1| 467|Homo sapiens LRRC56 protein protein. 29 9.9
AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, he... 29 9.9
AK024495-1|BAB15785.1| 294|Homo sapiens FLJ00101 protein protein. 29 9.9
AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein. 29 9.9
>U60666-1|AAB02976.1| 463|Homo sapiens testis specific leucine rich
repeat protein protein.
Length = 463
Score = 76.2 bits (179), Expect = 9e-14
Identities = 31/57 (54%), Positives = 45/57 (78%)
Frame = +3
Query: 396 ITVELVRKKAEHHDCLLAPLEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKIE 566
IT +L+R+ AEH+DC++ LEE++LHQ+ IE++E + WC LKIL +Q+NLI KIE
Sbjct: 4 ITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIE 60
>BC047286-1|AAH47286.1| 466|Homo sapiens leucine rich repeat
containing 6 protein.
Length = 466
Score = 76.2 bits (179), Expect = 9e-14
Identities = 31/57 (54%), Positives = 45/57 (78%)
Frame = +3
Query: 396 ITVELVRKKAEHHDCLLAPLEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKIE 566
IT +L+R+ AEH+DC++ LEE++LHQ+ IE++E + WC LKIL +Q+NLI KIE
Sbjct: 4 ITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIE 60
>BC027589-1|AAH27589.1| 411|Homo sapiens LRRC6 protein protein.
Length = 411
Score = 76.2 bits (179), Expect = 9e-14
Identities = 31/57 (54%), Positives = 45/57 (78%)
Frame = +3
Query: 396 ITVELVRKKAEHHDCLLAPLEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKIE 566
IT +L+R+ AEH+DC++ LEE++LHQ+ IE++E + WC LKIL +Q+NLI KIE
Sbjct: 4 ITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIE 60
>BC089415-1|AAH89415.1| 446|Homo sapiens CEP110 protein protein.
Length = 446
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 396 ITVELVRKKAEHHDCLLAPLEEIALHQENIEKIEFLQDW--CPKLKILLMQSNLIAKIE 566
IT L++K + + L ++L ++ +K +++++ C KL++L + NLI KIE
Sbjct: 83 ITEALIKKLTKQDNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIE 141
>AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110kDa
protein.
Length = 2325
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 396 ITVELVRKKAEHHDCLLAPLEEIALHQENIEKIEFLQDW--CPKLKILLMQSNLIAKIE 566
IT L++K + + L ++L ++ +K +++++ C KL++L + NLI KIE
Sbjct: 83 ITEALIKKLTKQDNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIE 141
>AL137068-1|CAI12355.1| 452|Homo sapiens centrosomal protein 110kDa
protein.
Length = 452
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 396 ITVELVRKKAEHHDCLLAPLEEIALHQENIEKIEFLQDW--CPKLKILLMQSNLIAKIE 566
IT L++K + + L ++L ++ +K +++++ C KL++L + NLI KIE
Sbjct: 83 ITEALIKKLTKQDNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIE 141
>AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein.
Length = 2325
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 396 ITVELVRKKAEHHDCLLAPLEEIALHQENIEKIEFLQDW--CPKLKILLMQSNLIAKIE 566
IT L++K + + L ++L ++ +K +++++ C KL++L + NLI KIE
Sbjct: 83 ITEALIKKLTKQDNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIE 141
>BC035937-1|AAH35937.1| 542|Homo sapiens leucine rich repeat
containing 56 protein.
Length = 542
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 438 CLLAPLEEIALHQENIE---KIEFLQDWCPKLKILLMQSNLI 554
CLL LE + L ++E ++ +LQ CP+L +L ++ NL+
Sbjct: 157 CLLEQLEVLDLEGNSVEDLGQVRYLQ-LCPRLAMLTLEGNLV 197
>BC016439-1|AAH16439.1| 467|Homo sapiens LRRC56 protein protein.
Length = 467
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 438 CLLAPLEEIALHQENIE---KIEFLQDWCPKLKILLMQSNLI 554
CLL LE + L ++E ++ +LQ CP+L +L ++ NL+
Sbjct: 82 CLLEQLEVLDLEGNSVEDLGQVRYLQ-LCPRLAMLTLEGNLV 122
>AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, heavy
polypeptide 1 protein.
Length = 4646
Score = 29.5 bits (63), Expect = 9.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 550 RLLCISSIFNLGHQSCRN 497
RL C+ S+F++ HQ+CRN
Sbjct: 2451 RLRCLGSLFSMLHQACRN 2468
>AK024495-1|BAB15785.1| 294|Homo sapiens FLJ00101 protein protein.
Length = 294
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 438 CLLAPLEEIALHQENIE---KIEFLQDWCPKLKILLMQSNLI 554
CLL LE + L ++E ++ +LQ CP+L +L ++ NL+
Sbjct: 157 CLLEQLEVLDLEGNSVEDLGQVRYLQ-LCPRLAMLTLEGNLV 197
>AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.
Length = 4658
Score = 29.5 bits (63), Expect = 9.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 550 RLLCISSIFNLGHQSCRN 497
RL C+ S+F++ HQ+CRN
Sbjct: 2463 RLRCLGSLFSMLHQACRN 2480
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,659,155
Number of Sequences: 237096
Number of extensions: 1533315
Number of successful extensions: 2915
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2915
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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