Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18e14
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           24   4.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   7.7  

>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = +1

Query: 1   DTVSCHSVTIKSIVPNSK*ISLLNLFNKKIISLLATLNLIKTNMEVEE 144
           D  +CH   + +IV  S  ++ + + NKK ++L+   ++I   + + E
Sbjct: 12  DDANCHVGDLGNIVAYSTGLAKIQIANKK-LTLVGDRSIIGRTLSISE 58


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 498 FICSQKRNLFEETAEVDRTSGCYIK 572
           ++C QKR + E   E D+ +G   K
Sbjct: 314 YLCEQKRKIGEFEVERDQAAGILAK 338


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,628
Number of Sequences: 2352
Number of extensions: 9316
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)