Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18e12
         (509 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ310721-1|ABC40719.1|  606|Homo sapiens nei endonuclease VIII-l...    29   7.1  
BC025954-1|AAH25954.1|  605|Homo sapiens nei endonuclease VIII-l...    29   7.1  
AK001720-1|BAA91860.1|  605|Homo sapiens protein ( Homo sapiens ...    29   7.1  
AB079071-1|BAC06479.1|  605|Homo sapiens hypothetical protein pr...    29   7.1  

>DQ310721-1|ABC40719.1|  606|Homo sapiens nei endonuclease VIII-like
           3 (E. coli) protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 125 YKCRNCQKHTIQHIDIC 175
           Y C +CQK   QH+DIC
Sbjct: 275 YFCPHCQKENPQHVDIC 291


>BC025954-1|AAH25954.1|  605|Homo sapiens nei endonuclease VIII-like
           3 (E. coli) protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 125 YKCRNCQKHTIQHIDIC 175
           Y C +CQK   QH+DIC
Sbjct: 274 YFCPHCQKENPQHVDIC 290


>AK001720-1|BAA91860.1|  605|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10858 fis, clone NT2RP4001555. ).
          Length = 605

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 125 YKCRNCQKHTIQHIDIC 175
           Y C +CQK   QH+DIC
Sbjct: 274 YFCPHCQKENPQHVDIC 290


>AB079071-1|BAC06479.1|  605|Homo sapiens hypothetical protein
           protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 125 YKCRNCQKHTIQHIDIC 175
           Y C +CQK   QH+DIC
Sbjct: 274 YFCPHCQKENPQHVDIC 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,317,079
Number of Sequences: 237096
Number of extensions: 1072282
Number of successful extensions: 6010
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6010
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)