Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18e09
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 35 0.060
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 34 0.080
08_01_0626 - 5445676-5446687,5447099-5447430 31 0.56
11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363 31 0.98
02_05_0744 - 31428834-31428991,31429079-31429155,31429252-314293... 30 1.3
11_03_0066 + 9529969-9530166,9530271-9530450,9530559-9531287,953... 30 1.7
04_03_0357 + 14852584-14853058,14853116-14855754 29 3.0
12_01_0468 + 3661177-3661626 29 4.0
11_01_0649 - 5259038-5259195,5259824-5259887,5260446-5260512,526... 29 4.0
07_03_1228 - 25009736-25010965 29 4.0
06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194 29 4.0
06_03_0949 - 26262993-26263130,26263602-26263670,26263809-26264030 29 4.0
05_03_0100 + 8391700-8392390,8392531-8392812,8393767-8394317 29 4.0
01_06_1357 + 36632992-36633621,36634003-36635136,36635525-366361... 28 5.2
01_05_0167 + 18849791-18849973,18850081-18850250,18850341-188504... 28 5.2
02_03_0226 - 16591383-16592030,16592132-16592211,16592246-165929... 28 6.9
03_06_0146 - 31976538-31978643,31978653-31978751 27 9.2
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 27 9.2
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 467 DSGEEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQ 607
D EEEV E + E EEE +DED+ + +E++EE++E+
Sbjct: 434 DDEEEEVEEEEIEYEEIEEEIEEEEEVEEDEDVVEEVEEVDEEEDEE 480
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 34.3 bits (75), Expect = 0.080
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 467 DSGEEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQYE 613
D EEE VE E EEE +DED+ + +E++EE++E+ E
Sbjct: 26 DDDEEEEVEEEEIEYEEIEEEIEEEEVEEDEDVVEEVEEVDEEEDEEEE 74
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 467 DSGEEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQ 607
D GEE+ E +EN+ EEE +DED+D+ +++ EE+ ++
Sbjct: 226 DEGEEDE-EIEEDEDENNDDDDEEEEMEEDEDLDEDKNDVVEEEEDE 271
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 476 EEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQYE 613
EEE E E+ +E+ +DE+I++ DE N++D+E+ E
Sbjct: 205 EEEEEEEDEFLYEDENVDDDEDEGEEDEEIEEDEDENNDDDDEEEE 250
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 467 DSGEEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQYESW 619
D EEE +E +E+ EEE +DED+D E +++NE E W
Sbjct: 244 DDDEEEEMEEDEDLDEDKNDVVEEE---EDEDMD----EGEDDENETNEEW 287
>11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363
Length = 394
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 467 DSGEEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQYE 613
D EEE E + + +PF E E + K E D+ ++ +E+D+++ E
Sbjct: 337 DQDEEEEDEDEDEDSYENPFEDENEDSYKGEHEDEDNEDEDEDDDDEDE 385
>02_05_0744 -
31428834-31428991,31429079-31429155,31429252-31429302,
31429379-31429452,31429522-31429647,31431317-31431461,
31431552-31432114
Length = 397
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 467 DSGEEEVVERSSQTNENS-PFTPEEEATVKDED 562
+SG++E ERSS N NS P T AT DED
Sbjct: 13 ESGDDEKAERSSPINLNSLPATAACAATAPDED 45
>11_03_0066 +
9529969-9530166,9530271-9530450,9530559-9531287,
9531554-9531706,9531803-9532238,9532322-9532501,
9532643-9532889,9533090-9533123,9533385-9533489,
9533833-9533967,9534220-9534399,9534504-9534626
Length = 899
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 476 EEEVVERSSQTNENSPFTPEE-EATVKDEDIDKFCDELNEEDNEQYE 613
+ +V E+++Q + + +E E V++ED D++ D++ +ED E E
Sbjct: 68 KSKVAEKATQDHTKHKLSEQEPEDEVEEEDEDEYEDDVEDEDEEVEE 114
>04_03_0357 + 14852584-14853058,14853116-14855754
Length = 1037
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 476 EEEVVERSSQTNENSPFTPEEEATVKDEDIDKF--CDELNEEDNEQ 607
E E E S Q E S PE E+ +D D + DE +E+D+E+
Sbjct: 927 ETEETEESDQGYEPSDAEPESESEDEDSDSESLVESDEDDEDDSEE 972
>12_01_0468 + 3661177-3661626
Length = 149
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 476 EEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQYE 613
EEE +E E EEE ++E++ + E EE NE+ +
Sbjct: 76 EEEDIEEEEVVEEEEEEIEEEEVKEEEEELREQVQEAGEEVNEEQQ 121
>11_01_0649 -
5259038-5259195,5259824-5259887,5260446-5260512,
5260534-5260607,5260725-5261510,5262623-5262685
Length = 403
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 533 EEEATVKDEDIDKFCDELNEEDNEQYE 613
E+E + +DED D F D EED E+ E
Sbjct: 375 EDENSHEDEDEDSFGDPYEEEDEEEDE 401
>07_03_1228 - 25009736-25010965
Length = 409
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 467 DSGEEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDE--LNEEDNEQYESWV 622
+ GEEE E + E EEE ++ED ++ +E + E++NE+ E V
Sbjct: 331 EGGEEEEEEEEEEEEEEPEEGAEEEEDDEEEDEEEEEEEEDIEEDENEEEEEEV 384
>06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194
Length = 569
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 479 EEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNE 604
EE E N + P PE++A D+D+ D+L E+D E
Sbjct: 82 EEAAEVDDDRNLDQP--PEKDAEAAKVDVDRKLDQLPEKDAE 121
>06_03_0949 - 26262993-26263130,26263602-26263670,26263809-26264030
Length = 142
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/19 (47%), Positives = 17/19 (89%)
Frame = +2
Query: 554 DEDIDKFCDELNEEDNEQY 610
DED+DK+ + LN+ED++++
Sbjct: 121 DEDLDKYRNHLNDEDDDEW 139
>05_03_0100 + 8391700-8392390,8392531-8392812,8393767-8394317
Length = 507
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 467 DSGEEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQ 607
+SG+EE V + ++N + EE K + K E N+E +E+
Sbjct: 323 NSGDEETVSEARESNNSEMHNDEESKPPKPAGLKKSLVEKNDELSEE 369
>01_06_1357 +
36632992-36633621,36634003-36635136,36635525-36636193,
36636250-36636343,36636378-36636490
Length = 879
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 476 EEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNE 604
E+E E+ + SP T + + V+DED + + ED E
Sbjct: 392 EQEAAEKEDEVRAASPGTEDSKRAVQDEDGEAEATGSDSEDGE 434
>01_05_0167 +
18849791-18849973,18850081-18850250,18850341-18850413,
18850729-18850839,18850947-18850992,18851085-18851148,
18851810-18851912,18851999-18852094,18852186-18852215,
18852434-18852533,18852761-18852845,18852965-18853088
Length = 394
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 470 SGEEEVVERSSQTNENSPFTPEEEATVKDEDIDKFCD---ELNEEDNE 604
SG E+ + SS +++ E+E DE+ D+ D E+NEED+E
Sbjct: 50 SGSEDDRQVSSSNDDDDSEEEEQEEREMDEEEDEEDDDDEEMNEEDDE 97
>02_03_0226 -
16591383-16592030,16592132-16592211,16592246-16592971,
16593060-16593192,16596839-16597518,16597604-16597666,
16597740-16597916,16598414-16598542,16598638-16598796,
16599057-16599224,16599418-16599519,16599812-16599857
Length = 1036
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 482 EVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQY 610
+V SS E+S + T D+D+D F D+ + D+E Y
Sbjct: 236 DVPSTSSLQTEHSTYHRTRSCTFDDDDMDSFMDD--DSDDEYY 276
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 467 DSGEEEVVERSSQTNENSPFTPEE---EATVKDEDIDKFCDELNEED 598
D EE+ + S ++E++ T EE E + DE+ID DE EED
Sbjct: 216 DYEEEDTTDLESDSDEDTESTDEESDYEEEIDDEEID---DESVEED 259
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 482 EVVERSSQTNENSPFTPEEEATVKDEDIDKFCDELNEEDNEQYE 613
E+V + + P + +++ V+ ED+D+ E N E+ E+ E
Sbjct: 313 EIVPKLKKKKSVKPSSSDDDDDVEVEDVDEEIGEENAEEEEEEE 356
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,882,494
Number of Sequences: 37544
Number of extensions: 148003
Number of successful extensions: 677
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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