Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18e08
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL833081-1|CAD89975.1| 341|Homo sapiens hypothetical protein pr... 112 1e-24
AL445493-1|CAH70775.1| 348|Homo sapiens YOD1 OTU deubiquinating... 112 1e-24
AL445493-2|CAH70776.1| 304|Homo sapiens YOD1 OTU deubiquinating... 102 1e-21
AK128014-1|BAC87233.1| 304|Homo sapiens protein ( Homo sapiens ... 100 4e-21
M68864-1|AAA36396.1| 298|Homo sapiens protein ( Human ORF mRNA,... 32 1.5
BC040129-1|AAH40129.1| 297|Homo sapiens LOC51035 protein protein. 32 1.5
BC000902-1|AAH00902.1| 297|Homo sapiens LOC51035 protein protein. 32 1.5
>AL833081-1|CAD89975.1| 341|Homo sapiens hypothetical protein
protein.
Length = 341
Score = 112 bits (269), Expect = 1e-24
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +1
Query: 145 KIKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSE 324
+ K+K+G VL+ L+S + V EL+ +++I+ I+ IL GYPP+ LD S+ L +
Sbjct: 43 RCKAKDGTHVLQGLSSRTRVRELQGQIAAITGIAPGGQRILVGYPPECLDLSNGDTILED 102
Query: 325 LGLKTGETLIVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCLF 504
L +++G+ LI+EE + T+ + P+ + + P +L + VVP+DNSCLF
Sbjct: 103 LPIQSGDMLIIEE------DQTRPRSSPAFTKRGASSYVRETLP-VLTRTVVPADNSCLF 155
Query: 505 TSIGFVLNGSI-DTSVHTLMRQIIAMEVASDRDTYXEAMLGKPNAEYC 645
TS+ +V+ G + + + MR++IA VASD D Y EA+LGK N EYC
Sbjct: 156 TSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQEYC 203
>AL445493-1|CAH70775.1| 348|Homo sapiens YOD1 OTU deubiquinating
enzyme 1 homolog (S. cerevisiae) protein.
Length = 348
Score = 112 bits (269), Expect = 1e-24
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +1
Query: 145 KIKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSE 324
+ K+K+G VL+ L+S + V EL+ +++I+ I+ IL GYPP+ LD S+ L +
Sbjct: 50 RCKAKDGTHVLQGLSSRTRVRELQGQIAAITGIAPGGQRILVGYPPECLDLSNGDTILED 109
Query: 325 LGLKTGETLIVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCLF 504
L +++G+ LI+EE + T+ + P+ + + P +L + VVP+DNSCLF
Sbjct: 110 LPIQSGDMLIIEE------DQTRPRSSPAFTKRGASSYVRETLP-VLTRTVVPADNSCLF 162
Query: 505 TSIGFVLNGSI-DTSVHTLMRQIIAMEVASDRDTYXEAMLGKPNAEYC 645
TS+ +V+ G + + + MR++IA VASD D Y EA+LGK N EYC
Sbjct: 163 TSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQEYC 210
>AL445493-2|CAH70776.1| 304|Homo sapiens YOD1 OTU deubiquinating
enzyme 1 homolog (S. cerevisiae) protein.
Length = 304
Score = 102 bits (244), Expect = 1e-21
Identities = 59/158 (37%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +1
Query: 175 LKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSELGLKTGETLI 354
++ L+S + V EL+ +++I+ I+ IL GYPP+ LD S+ L +L +++G+ LI
Sbjct: 16 VEGLSSRTRVRELQGQIAAITGIAPGGQRILVGYPPECLDLSNGDTILEDLPIQSGDMLI 75
Query: 355 VEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCLFTSIGFVLNGS 534
+EE + T+ + P+ + + P +L + VVP+DNSCLFTS+ +V+ G
Sbjct: 76 IEE------DQTRPRSSPAFTKRGASSYVRETLP-VLTRTVVPADNSCLFTSVYYVVEGG 128
Query: 535 I-DTSVHTLMRQIIAMEVASDRDTYXEAMLGKPNAEYC 645
+ + + MR++IA VASD D Y EA+LGK N EYC
Sbjct: 129 VLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQEYC 166
>AK128014-1|BAC87233.1| 304|Homo sapiens protein ( Homo sapiens
cDNA FLJ46133 fis, clone TESTI2051742. ).
Length = 304
Score = 100 bits (240), Expect = 4e-21
Identities = 58/158 (36%), Positives = 94/158 (59%), Gaps = 1/158 (0%)
Frame = +1
Query: 175 LKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSELGLKTGETLI 354
++ L+S + V EL+ +++I+ I+ I GYPP+ LD S+ L +L +++G+ LI
Sbjct: 16 VEGLSSRTRVRELQGQIAAITGIAPGGQRIFVGYPPECLDLSNGDTILEDLPIQSGDMLI 75
Query: 355 VEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCLFTSIGFVLNGS 534
+EE + T+ + P+ + + P +L + VVP+DNSCLFTS+ +V+ G
Sbjct: 76 IEE------DQTRPRSSPAFTKRGASSYVRETLP-VLTRTVVPADNSCLFTSVYYVVEGG 128
Query: 535 I-DTSVHTLMRQIIAMEVASDRDTYXEAMLGKPNAEYC 645
+ + + MR++IA VASD D Y EA+LGK N EYC
Sbjct: 129 VLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQEYC 166
>M68864-1|AAA36396.1| 298|Homo sapiens protein ( Human ORF mRNA,
complete cds. ).
Length = 298
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 256 VNILCGYPPKALDTSDNSKTLSELGLKTGETLIVEEK 366
V +L G+P +A +D + L ELGL LIV +K
Sbjct: 259 VQLLSGFPRRAFSEADMERPLQELGLVPSAVLIVAKK 295
>BC040129-1|AAH40129.1| 297|Homo sapiens LOC51035 protein protein.
Length = 297
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 256 VNILCGYPPKALDTSDNSKTLSELGLKTGETLIVEEK 366
V +L G+P +A +D + L ELGL LIV +K
Sbjct: 258 VQLLSGFPRRAFSEADMERPLQELGLVPSAVLIVAKK 294
>BC000902-1|AAH00902.1| 297|Homo sapiens LOC51035 protein protein.
Length = 297
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 256 VNILCGYPPKALDTSDNSKTLSELGLKTGETLIVEEK 366
V +L G+P +A +D + L ELGL LIV +K
Sbjct: 258 VQLLSGFPRRAFSEADMERPLQELGLVPSAVLIVAKK 294
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,438,338
Number of Sequences: 237096
Number of extensions: 1590392
Number of successful extensions: 2849
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2841
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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