Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18e06
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2709|AAF49483.2|  188|Drosophila melanogaster CG13037-P...   128   5e-30

>AE014296-2709|AAF49483.2|  188|Drosophila melanogaster CG13037-PA
           protein.
          Length = 188

 Score =  128 bits (310), Expect = 5e-30
 Identities = 60/135 (44%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
 Frame = +3

Query: 129 VIKYVGRTTDFKGKSLWEIVGSLKNFGVGRIIVRSVFLRYPEPSFMKIVKVQTCPD--XX 302
           VIKY+GRTTDF+G +LWE+V +L N+GVGR+++R++F RYPEP +M+I+KVQ+  +    
Sbjct: 5   VIKYIGRTTDFRGNTLWELVSNLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVDEQPGE 64

Query: 303 XXXXXXXXXKTFRGQKLPNITEIYRTSYKTDYQLIPKREETRLLESINTIGNKADVILPN 482
                    KT+RG   P   EIY TSYK DY+L+P+ +E + L +   +     VILP 
Sbjct: 65  IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDQEAKYLNNKKKV---EPVILPT 121

Query: 483 SIEMPPLMKLFIIKD 527
            IE+PPL++  + ++
Sbjct: 122 KIELPPLLRELVSEE 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,228,069
Number of Sequences: 53049
Number of extensions: 518281
Number of successful extensions: 878
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)