Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18e02
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014926-1|AAT47777.1|  742|Drosophila melanogaster AT12465p pro...    43   3e-04
BT011397-1|AAR96189.1|  998|Drosophila melanogaster AT24804p pro...    43   3e-04
AY119510-1|AAM50164.1|  998|Drosophila melanogaster GH12664p pro...    43   3e-04
AE014297-4541|AAN14216.1|  742|Drosophila melanogaster CG31025-P...    43   3e-04
AE014297-4540|AAF57010.4|  998|Drosophila melanogaster CG31025-P...    43   3e-04
BT001299-1|AAN71054.1|  905|Drosophila melanogaster AT12234p pro...    43   4e-04
AE014297-4542|AAN14217.1|  905|Drosophila melanogaster CG31029-P...    43   4e-04
AY058341-1|AAL13570.1| 1024|Drosophila melanogaster GH11706p pro...    36   0.043
AE014297-1806|AAF55026.1| 1024|Drosophila melanogaster CG14355-P...    36   0.043
BT001326-1|AAN71081.1|  687|Drosophila melanogaster AT17065p pro...    30   2.9  
AE014297-1810|AAN13597.1|  861|Drosophila melanogaster CG31327-P...    30   2.9  
D50542-1|BAA09102.1|  486|Drosophila melanogaster GATA transcrip...    29   3.8  
AY071369-1|AAL48991.1|  486|Drosophila melanogaster RE40104p pro...    29   3.8  
AE014297-700|AAF54195.1|  486|Drosophila melanogaster CG9656-PA ...    29   3.8  

>BT014926-1|AAT47777.1|  742|Drosophila melanogaster AT12465p
           protein.
          Length = 742

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
 Frame = +3

Query: 276 VPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 455
           VP+ MGWLW A      KP  GW+PG I +S+  +M++   +                  
Sbjct: 347 VPSHMGWLWTAHPLAN-KP--GWRPGAIRRSIRGLMSYFL-KDFPVDNVPVSKYMSYYKH 402

Query: 456 XXXXXXXDSEPDEPLEPKPALKV-----------NPLKDLTEIAPNEDPYVDCDPLVFKI 602
                    E  E L   P L +            PLKD   +A + +PYV   P+ F+I
Sbjct: 403 KMSPMSPPGEKAEDLVQVPTLHIEKKNDVYTITLRPLKDAKTLARSANPYVRMKPVQFRI 462

Query: 603 IK 608
           +K
Sbjct: 463 VK 464


>BT011397-1|AAR96189.1|  998|Drosophila melanogaster AT24804p
           protein.
          Length = 998

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
 Frame = +3

Query: 276 VPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 455
           VP+ MGWLW A      KP  GW+PG I +S+  +M++   +                  
Sbjct: 603 VPSHMGWLWTAHPLAN-KP--GWRPGAIRRSIRGLMSYFL-KDFPVDNVPVSKYMSYYKH 658

Query: 456 XXXXXXXDSEPDEPLEPKPALKV-----------NPLKDLTEIAPNEDPYVDCDPLVFKI 602
                    E  E L   P L +            PLKD   +A + +PYV   P+ F+I
Sbjct: 659 KMSPMSPPGEKAEDLVQVPTLHIEKKNDVYTITLRPLKDAKTLARSANPYVRMKPVQFRI 718

Query: 603 IK 608
           +K
Sbjct: 719 VK 720


>AY119510-1|AAM50164.1|  998|Drosophila melanogaster GH12664p
           protein.
          Length = 998

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
 Frame = +3

Query: 276 VPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 455
           VP+ MGWLW A      KP  GW+PG I +S+  +M++   +                  
Sbjct: 603 VPSHMGWLWTAHPLAN-KP--GWRPGAIRRSIRGLMSYFL-KDFPVDNVPVSKYMSYYKH 658

Query: 456 XXXXXXXDSEPDEPLEPKPALKV-----------NPLKDLTEIAPNEDPYVDCDPLVFKI 602
                    E  E L   P L +            PLKD   +A + +PYV   P+ F+I
Sbjct: 659 KMSPMSPPGEKAEDLVQVPTLHIEKKNDVYTITLRPLKDAKTLARSANPYVRMKPVQFRI 718

Query: 603 IK 608
           +K
Sbjct: 719 VK 720


>AE014297-4541|AAN14216.1|  742|Drosophila melanogaster CG31025-PB,
           isoform B protein.
          Length = 742

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
 Frame = +3

Query: 276 VPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 455
           VP+ MGWLW A      KP  GW+PG I +S+  +M++   +                  
Sbjct: 347 VPSHMGWLWTAHPLAN-KP--GWRPGAIRRSIRGLMSYFL-KDFPVDNVPVSKYMSYYKH 402

Query: 456 XXXXXXXDSEPDEPLEPKPALKV-----------NPLKDLTEIAPNEDPYVDCDPLVFKI 602
                    E  E L   P L +            PLKD   +A + +PYV   P+ F+I
Sbjct: 403 KMSPMSPPGEKAEDLVQVPTLHIEKKNDVYTITLRPLKDAKTLARSANPYVRMKPVQFRI 462

Query: 603 IK 608
           +K
Sbjct: 463 VK 464


>AE014297-4540|AAF57010.4|  998|Drosophila melanogaster CG31025-PA,
           isoform A protein.
          Length = 998

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
 Frame = +3

Query: 276 VPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 455
           VP+ MGWLW A      KP  GW+PG I +S+  +M++   +                  
Sbjct: 603 VPSHMGWLWTAHPLAN-KP--GWRPGAIRRSIRGLMSYFL-KDFPVDNVPVSKYMSYYKH 658

Query: 456 XXXXXXXDSEPDEPLEPKPALKV-----------NPLKDLTEIAPNEDPYVDCDPLVFKI 602
                    E  E L   P L +            PLKD   +A + +PYV   P+ F+I
Sbjct: 659 KMSPMSPPGEKAEDLVQVPTLHIEKKNDVYTITLRPLKDAKTLARSANPYVRMKPVQFRI 718

Query: 603 IK 608
           +K
Sbjct: 719 VK 720


>BT001299-1|AAN71054.1|  905|Drosophila melanogaster AT12234p
           protein.
          Length = 905

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
 Frame = +3

Query: 276 VPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 455
           +P  MGW+W  ++    K    W+PG I + + ++M++                      
Sbjct: 597 IPCHMGWMWTKSEMARHK---SWRPGAISRPIRQLMSY-----FLKDFPADNICLSRYHY 648

Query: 456 XXXXXXXDSEPDEPLEPKPALKVN-----------PLKDLTEIAPNEDPYVDCDPLVFKI 602
                    E +EPL   P L ++           PLKD   +A + +PY D  P+VF+I
Sbjct: 649 RHKKCRRVEELEEPLVQHPTLHISRKGDEYIITLRPLKDPKALASSANPYADMKPVVFRI 708

Query: 603 IK 608
            K
Sbjct: 709 TK 710


>AE014297-4542|AAN14217.1|  905|Drosophila melanogaster CG31029-PA
           protein.
          Length = 905

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
 Frame = +3

Query: 276 VPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 455
           +P  MGW+W  ++    K    W+PG I + + ++M++                      
Sbjct: 597 IPCHMGWMWTKSEMARHK---SWRPGAISRPIRQLMSY-----FLKDFPADNICLSRYHY 648

Query: 456 XXXXXXXDSEPDEPLEPKPALKVN-----------PLKDLTEIAPNEDPYVDCDPLVFKI 602
                    E +EPL   P L ++           PLKD   +A + +PY D  P+VF+I
Sbjct: 649 RHKKCRRVEELEEPLVQHPTLHISRKGDEYIITLRPLKDPKALASSANPYADMKPVVFRI 708

Query: 603 IK 608
            K
Sbjct: 709 TK 710


>AY058341-1|AAL13570.1| 1024|Drosophila melanogaster GH11706p
           protein.
          Length = 1024

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 21/50 (42%), Positives = 30/50 (60%)
 Frame = +3

Query: 240 HKPCMFLRPGLPVPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTF 389
           HK C+ LR G  V  + GW W+  ++  AK + GW+PG I K + K+M F
Sbjct: 552 HKRCV-LRSGF-VSRQHGWAWS--NSWEAK-KLGWRPGAIRKPIKKLMKF 596


>AE014297-1806|AAF55026.1| 1024|Drosophila melanogaster CG14355-PA
           protein.
          Length = 1024

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 21/50 (42%), Positives = 30/50 (60%)
 Frame = +3

Query: 240 HKPCMFLRPGLPVPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTF 389
           HK C+ LR G  V  + GW W+  ++  AK + GW+PG I K + K+M F
Sbjct: 552 HKRCV-LRSGF-VSRQHGWAWS--NSWEAK-KLGWRPGAIRKPIKKLMKF 596


>BT001326-1|AAN71081.1|  687|Drosophila melanogaster AT17065p
           protein.
          Length = 687

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +3

Query: 237 GHKPCMFLRPGLPVPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTF 389
           GHK C  L     VP + GW W  +    AK + GW+PG I ++  ++M F
Sbjct: 366 GHKTC--LPDQHLVPRQHGWDWPRSWL--AK-KYGWRPGAILRAACQVMRF 411


>AE014297-1810|AAN13597.1|  861|Drosophila melanogaster CG31327-PA
           protein.
          Length = 861

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +3

Query: 237 GHKPCMFLRPGLPVPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTF 389
           GHK C  L     VP + GW W  +    AK + GW+PG I ++  ++M F
Sbjct: 540 GHKTC--LPDQHLVPRQHGWDWPRSWL--AK-KYGWRPGAILRAACQVMRF 585


>D50542-1|BAA09102.1|  486|Drosophila melanogaster GATA
           transcription factor protein.
          Length = 486

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 340 PRRGFAPGVSAAFHSHPILAGTGKPGLKNMHGLW 239
           P +GF  G SA+   H  L+    P   +MHG W
Sbjct: 403 PSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSW 436


>AY071369-1|AAL48991.1|  486|Drosophila melanogaster RE40104p
           protein.
          Length = 486

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 340 PRRGFAPGVSAAFHSHPILAGTGKPGLKNMHGLW 239
           P +GF  G SA+   H  L+    P   +MHG W
Sbjct: 403 PSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSW 436


>AE014297-700|AAF54195.1|  486|Drosophila melanogaster CG9656-PA
           protein.
          Length = 486

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 340 PRRGFAPGVSAAFHSHPILAGTGKPGLKNMHGLW 239
           P +GF  G SA+   H  L+    P   +MHG W
Sbjct: 403 PSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSW 436


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,650,147
Number of Sequences: 53049
Number of extensions: 436276
Number of successful extensions: 1394
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)