Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18e01
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23510-3|AAC46782.1| 340|Caenorhabditis elegans Hypothetical pr... 33 0.20
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 30 1.8
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 30 1.8
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 30 1.8
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 30 1.8
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 30 1.8
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 30 1.8
AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical ... 27 9.8
>U23510-3|AAC46782.1| 340|Caenorhabditis elegans Hypothetical
protein R12C12.3 protein.
Length = 340
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 217 VFWILFIFCNAF*MFLDVH*I*FTSSIFYIGVSWQVVLRYTLYSFLFVINNFFF 56
V I F FC+ F MFL V F + W+V +T++ +F ++ FF
Sbjct: 235 VVTIFFAFCHLFSMFLKVAESIFGGFLTQTSFYWEVFAEFTIFLIIFHTSSTFF 288
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -2
Query: 673 VINKAASASQYTFNHLSDILFLTLKPIMSQLAEILTIQKNLEENFTRKMGELETQIQSAG 494
V N + AS T +S+ L L+P Q A+ + I LE+N R+ E+E +++ A
Sbjct: 2752 VSNNSGEASTSTSFEVSESSGLILQPQNEQKAKAVEI---LEDNLRRRPEEIEQELKEAT 2808
Query: 493 P 491
P
Sbjct: 2809 P 2809
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -2
Query: 673 VINKAASASQYTFNHLSDILFLTLKPIMSQLAEILTIQKNLEENFTRKMGELETQIQSAG 494
V N + AS T +S+ L L+P Q A+ + I LE+N R+ E+E +++ A
Sbjct: 2669 VSNNSGEASTSTSFEVSESSGLILQPQNEQKAKAVEI---LEDNLRRRPEEIEQELKEAT 2725
Query: 493 P 491
P
Sbjct: 2726 P 2726
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -2
Query: 673 VINKAASASQYTFNHLSDILFLTLKPIMSQLAEILTIQKNLEENFTRKMGELETQIQSAG 494
V N + AS T +S+ L L+P Q A+ + I LE+N R+ E+E +++ A
Sbjct: 2990 VSNNSGEASTSTSFEVSESSGLILQPQNEQKAKAVEI---LEDNLRRRPEEIEQELKEAT 3046
Query: 493 P 491
P
Sbjct: 3047 P 3047
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -2
Query: 673 VINKAASASQYTFNHLSDILFLTLKPIMSQLAEILTIQKNLEENFTRKMGELETQIQSAG 494
V N + AS T +S+ L L+P Q A+ + I LE+N R+ E+E +++ A
Sbjct: 2990 VSNNSGEASTSTSFEVSESSGLILQPQNEQKAKAVEI---LEDNLRRRPEEIEQELKEAT 3046
Query: 493 P 491
P
Sbjct: 3047 P 3047
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -2
Query: 673 VINKAASASQYTFNHLSDILFLTLKPIMSQLAEILTIQKNLEENFTRKMGELETQIQSAG 494
V N + AS T +S+ L L+P Q A+ + I LE+N R+ E+E +++ A
Sbjct: 2990 VSNNSGEASTSTSFEVSESSGLILQPQNEQKAKAVEI---LEDNLRRRPEEIEQELKEAT 3046
Query: 493 P 491
P
Sbjct: 3047 P 3047
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -2
Query: 673 VINKAASASQYTFNHLSDILFLTLKPIMSQLAEILTIQKNLEENFTRKMGELETQIQSAG 494
V N + AS T +S+ L L+P Q A+ + I LE+N R+ E+E +++ A
Sbjct: 2685 VSNNSGEASTSTSFEVSESSGLILQPQNEQKAKAVEI---LEDNLRRRPEEIEQELKEAT 2741
Query: 493 P 491
P
Sbjct: 2742 P 2742
>AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2D.1 protein.
Length = 382
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -2
Query: 664 KAASASQYTFNHLSDILFLTLKPIMSQLAEILTIQKNLEENFTRKMGELETQIQSA 497
KA S + N SD+ L +S+ LT +NF + +G+ T+ Q++
Sbjct: 84 KAGRNSNFAVNQFSDLTTSELHQRLSRFPPNLTENSVFHKNFKKLLGKTRTKRQNS 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,599,017
Number of Sequences: 27780
Number of extensions: 325602
Number of successful extensions: 953
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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