Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18d23
(788 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.25
SPAC1399.04c |||uracil phosphoribosyltransferase |Schizosaccharo... 29 0.57
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 27 3.1
SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyc... 27 3.1
SPCC24B10.02c |||NAD/NADH kinase|Schizosaccharomyces pombe|chr 3... 27 4.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.0
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 26 7.1
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 26 7.1
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 7.1
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 26 7.1
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 26 7.1
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 26 7.1
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 26 7.1
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.7 bits (66), Expect = 0.25
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = -2
Query: 328 TILIQMKDSSAYFRNCSSTTVSNYDSQNCSSTTVSNYDSHNYSKMAYNLTLSHNSFHRMR 149
T+L + SSA SSTTVSN S S+T S N S +A +L LS +S +
Sbjct: 749 TLLSSITSSSAIV---SSTTVSNISSNLPSATASSQSQLTNSSTLATSLYLSSSSSRTIS 805
Query: 148 NS 143
S
Sbjct: 806 TS 807
>SPAC1399.04c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 220
Score = 29.5 bits (63), Expect = 0.57
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 607 ILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVY--FQSLMTRTMMKNNLVYF 434
++ RD + + L+ L KD+ +L P+L +SV Q+L+ + + + N+V+
Sbjct: 110 LVQRDETTFEAKLMFCKLPKDAQDRLVLLLDPLLATGNSVILAIQTLINKGIPEENIVFV 169
Query: 433 RILTILIQMKDSSAYFPSL 377
++ + + A FP L
Sbjct: 170 NLIACNEGITNVFAKFPKL 188
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -2
Query: 592 SSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVYFQSLMTRTMMKNNLVYFRILTI-- 419
SS +++ IL K + I+ P+LM + F SLM + + + V+F+ L +
Sbjct: 94 SSQIVFAILVTILNKQA---LNIINAPLLMLSFQMAFTSLMVKMYWRFSSVHFQTLRLAS 150
Query: 418 LIQMK 404
IQ+K
Sbjct: 151 AIQLK 155
>SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 266
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 672 LEVSPSYPFVWIRMVRIWEVN 734
LE SPS P WI R W+ N
Sbjct: 82 LESSPSEPHSWIYATRNWQTN 102
>SPCC24B10.02c |||NAD/NADH kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 449
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 232 TVSNYDSHNYSKMAYNLTLSHNSFHRMRNSFHYY 131
++SNY H Y + N++L S R++ SFH Y
Sbjct: 217 SLSNYQQHLYQVLTQNVSLRFCS--RLQCSFHKY 248
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 322 LIQMKDSSAYFRNCSSTTVSNYDSQNCSST-TVSNYDSHNYSKMAYNLTLSHNS 164
+I SS+ +S+T+S+ S + S T T S S + S +++ TLS +S
Sbjct: 272 IISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSS 325
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -2
Query: 400 SSAYFPSLMTRTMMRNNLVYFRILT---ILIQMKDSSAYFRNCSSTTVSNYDSQNCSSTT 230
+S P T+ +N+ +I+ + I DS+ R CS+ T +Q C++
Sbjct: 7 ASVILPEFGKGTVATDNIPIGKIIIRKRVDILSLDSANLTRTCSTCTEEKVKTQRCAACK 66
Query: 229 VSNYDSHNYSK 197
+ +Y S K
Sbjct: 67 IIHYCSKGCQK 77
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 280 SSTTVSNYDSQNCSSTTVSNYDSHNYSKMAYNLTLSHNS 164
SS S Y S++ STT N S AYN L H+S
Sbjct: 402 SSVNGSVYRSKSVKSTTSHNKVPERNSVPAYNEKLMHSS 440
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 292 FRNCSSTTVSNYDSQNCSSTTVSNYDSHNYSKMAYNLTLSHNSFHRMRN 146
FR+ S + N ++QN ST SN++ N S H S + + +
Sbjct: 144 FRS-SIAALRNLNTQNNQSTLASNHEDENVSSSGGQEMQDHGSVNNLES 191
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 25.8 bits (54), Expect = 7.1
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -2
Query: 559 ILMKDSSAYFQILTIPILMKDSSVYFQSLMTRTMMKNNLVYF----RILTILIQMKDSSA 392
+++KDS LT +L + F+ LM T+ +N VYF I I I M +
Sbjct: 785 LIVKDSLGMMHFLTSSLLNEQGLTAFEVLM--TVWCDNFVYFSNFKNISIICIAMTKIYS 842
Query: 391 YFPSLMTRTMMRNNLV 344
+ L+ ++ L+
Sbjct: 843 FDSPLLDSVQVKGELI 858
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 278 RAVPEVSRAILHLDQDCQDPEVNQVIPHHGSGHQAREVSR--AILHLDQDCQDPEVN 442
R +PE + + ++QDC D + I + H A SR ++ D QD V+
Sbjct: 395 RNLPEYNDVPVVINQDCYDKLIKDCIDERLAKHMAHIFSRDPLVIFSDSILQDNSVS 451
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 7.1
Identities = 19/92 (20%), Positives = 41/92 (44%)
Frame = -2
Query: 436 FRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFRNCSSTTVSNY 257
F + + I + D+ Y L+ + ++N L FR L + K+ + ++
Sbjct: 116 FHVHGLNIGLADNIVYINRLLEK--IKNELESFRCLCCHVPCKNKKLLREHMNNKRHFRL 173
Query: 256 DSQNCSSTTVSNYDSHNYSKMAYNLTLSHNSF 161
D + S+ + NY+ + ++T+SH+ F
Sbjct: 174 DPK---SSEYDEFYIINYASVTKSITISHSQF 202
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 36 RRIYHQNGQQNYFVVPLSFVF*CIY 110
R +YH+NG N+ + VF C++
Sbjct: 321 RALYHKNGTSNHRAGAVMIVFSCLF 345
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,332,760
Number of Sequences: 5004
Number of extensions: 41167
Number of successful extensions: 138
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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