Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18d23
         (788 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL121895-16|CAM14447.1|  398|Homo sapiens chromosome 20 open rea...    31   4.7  

>AL121895-16|CAM14447.1|  398|Homo sapiens chromosome 20 open
           reading frame 4 protein.
          Length = 398

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 18/94 (19%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
 Frame = -2

Query: 460 MMKNNLVYFRILTILI-QMKDSSA-YFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFR 287
           MMK++ +Y  +++IL  Q+ +  A +F  ++++     + +  + L +  ++K S     
Sbjct: 288 MMKHHTLYINLISILYHQLGEIPADFFVDIVSQDNFLTSTLQRQSLAVSPRLKCSDLIIA 347

Query: 286 NCSSTTVSNYDSQNCSSTTVSNYDSHNYSKMAYN 185
            CS   + +YD    +S        ++++++  N
Sbjct: 348 RCSLELLGSYDPPTSASRVAGTTGRYHHTRLINN 381


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,870,739
Number of Sequences: 237096
Number of extensions: 1548185
Number of successful extensions: 3239
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3228
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)