Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18d20
         (250 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    26   3.1  
U50308-8|AAG24032.1|  562|Caenorhabditis elegans Hypothetical pr...    25   7.1  
AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical...    25   7.1  
Z48809-6|CAE17928.1|  174|Caenorhabditis elegans Hypothetical pr...    25   9.4  

>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 22  FSIENEHXMGSLRVYFCDICXLMLVGINYFLLXEVVPVSIAPF 150
           FS++N++     R YF  +    LV    FL+   VP+ IAPF
Sbjct: 231 FSVQNQNLQ---RQYFIALVIQALVP-TMFLITPAVPILIAPF 269


>U50308-8|AAG24032.1|  562|Caenorhabditis elegans Hypothetical
           protein F07C3.10 protein.
          Length = 562

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 242 RLGVXESRGRLPGSGVTVGNPPQEQLPFRSXNGAILTGTTS 120
           +L + +  G +PG  +T  +  ++Q+     NG +LT ++S
Sbjct: 182 KLALADKYGAMPGWPLTQESFNEQQILMNQVNGDVLTDSSS 222


>AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical
           protein Y47D7A.16 protein.
          Length = 417

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 17  IHSALKTNIXWAP*GYIFATFAFSCWSGLIIFY 115
           IH  +K  I   P  +IF   A  C  GL  F+
Sbjct: 63  IHKGIKMTIPTVPLIFIFMVLACICQLGLCFFW 95


>Z48809-6|CAE17928.1|  174|Caenorhabditis elegans Hypothetical
           protein T01E8.9 protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 109 NN*SRPT*EXKCRKNIPSRSPXYV 38
           NN ++ T E KC + IP+ S  YV
Sbjct: 147 NNVAKETNEVKCLETIPNNSILYV 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,924,095
Number of Sequences: 27780
Number of extensions: 73015
Number of successful extensions: 172
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)