BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18d16
(711 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 38 4e-04
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 33 0.007
EF519528-1|ABP73591.1| 250|Anopheles gambiae APL2 protein. 30 0.062
EF519524-1|ABP73587.1| 250|Anopheles gambiae APL2 protein. 30 0.062
EF519516-1|ABP73579.1| 250|Anopheles gambiae APL2 protein. 30 0.062
EF519513-1|ABP73576.1| 250|Anopheles gambiae APL2 protein. 30 0.062
EF519512-1|ABP73575.1| 250|Anopheles gambiae APL2 protein. 30 0.062
EF519511-1|ABP73574.1| 250|Anopheles gambiae APL2 protein. 30 0.062
EF519510-1|ABP73573.1| 250|Anopheles gambiae APL2 protein. 30 0.062
EF519509-1|ABP73572.1| 250|Anopheles gambiae APL2 protein. 30 0.062
EF519520-1|ABP73583.1| 250|Anopheles gambiae APL2 protein. 30 0.082
EF519517-1|ABP73580.1| 250|Anopheles gambiae APL2 protein. 30 0.082
EF519515-1|ABP73578.1| 250|Anopheles gambiae APL2 protein. 30 0.082
EF519514-1|ABP73577.1| 250|Anopheles gambiae APL2 protein. 30 0.082
EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein. 30 0.082
EF519507-1|ABP73570.1| 250|Anopheles gambiae APL2 protein. 30 0.082
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 28 0.25
EF519526-1|ABP73589.1| 250|Anopheles gambiae APL2 protein. 28 0.25
EF519523-1|ABP73586.1| 250|Anopheles gambiae APL2 protein. 28 0.25
EF519522-1|ABP73585.1| 250|Anopheles gambiae APL2 protein. 28 0.25
EF519521-1|ABP73584.1| 250|Anopheles gambiae APL2 protein. 28 0.25
EF519525-1|ABP73588.1| 250|Anopheles gambiae APL2 protein. 28 0.33
EF519519-1|ABP73582.1| 250|Anopheles gambiae APL2 protein. 28 0.33
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 28 0.33
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 37.5 bits (83), Expect = 4e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 545 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFANNKKL 703
GL ++ +++ ++ + YIA AF G+ L + LS N L +L PE F+ K +
Sbjct: 232 GLGKLTDLRLQSNGLNYIADRAFEGLVSLSRLELSLNRLTNLPPELFSEAKHI 284
Score = 30.7 bits (66), Expect = 0.047
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 557 VATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKS--LHPETF 685
+ + + N+++ +AP F + L ++LSNN L S ++P TF
Sbjct: 284 IKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATF 328
Score = 23.8 bits (49), Expect = 5.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 599 APNAFHGVHDLYAVNLSNNNLKSLHPETFANNKKL 703
A F G+ L+ V LSNN L ++ TF+ L
Sbjct: 373 AKTTFLGLGALHTVILSNNRLSTVDHFTFSGLNSL 407
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 33.5 bits (73), Expect = 0.007
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFANNKKL 703
++ + T+ + ++ + Y+ + +G++ L ++L NN L +HPE F N L
Sbjct: 415 MNNLHTLLLSHNKLKYLDAYSLNGLYALSLLSLDNNALTGVHPEAFRNCSSL 466
Score = 28.7 bits (61), Expect = 0.19
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 563 TVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
TV + ++I I F G+++LY + L +NN+++ + F
Sbjct: 491 TVDLGENSISVIEEPGFRGMNNLYGLRLISNNIENFTRKAF 531
>EF519528-1|ABP73591.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.062
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519524-1|ABP73587.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.062
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519516-1|ABP73579.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.062
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519513-1|ABP73576.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.062
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519512-1|ABP73575.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.062
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGLIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519511-1|ABP73574.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.062
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519510-1|ABP73573.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.062
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519509-1|ABP73572.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.062
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519520-1|ABP73583.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 29.9 bits (64), Expect = 0.082
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGSIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519517-1|ABP73580.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 29.9 bits (64), Expect = 0.082
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGSIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519515-1|ABP73578.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 29.9 bits (64), Expect = 0.082
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGSIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519514-1|ABP73577.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 29.9 bits (64), Expect = 0.082
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGSIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 29.9 bits (64), Expect = 0.082
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGSIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>EF519507-1|ABP73570.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 29.9 bits (64), Expect = 0.082
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L A+N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGSIDDRLFQGCHSLTALNVSHNALKTFNVAQF 133
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 28.3 bits (60), Expect = 0.25
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 198 TTWGQGPG--SYYCSWQHARWYSANLSIKPSRKTKTPTTYWINMRIT-NPRNTKRFCT-T 365
+TW G G ++ S QH S+ ++ + T+TP T + T P T R T
Sbjct: 274 STWPVGIGVREFFQSRQHDHQTSSPIATRNRFTTRTPATSTEHRYTTRTPTTTHRLAART 333
Query: 366 RTGPVPET 389
T P PET
Sbjct: 334 STPPDPET 341
>EF519526-1|ABP73589.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 28.3 bits (60), Expect = 0.25
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L +N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTXLNVSHNALKTFNVAQF 133
>EF519523-1|ABP73586.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 28.3 bits (60), Expect = 0.25
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L +N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTXLNVSHNALKTFNVAQF 133
>EF519522-1|ABP73585.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 28.3 bits (60), Expect = 0.25
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L +N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTXLNVSHNALKTFNVAQF 133
>EF519521-1|ABP73584.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 28.3 bits (60), Expect = 0.25
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L +N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGXIDDRLFQGCHSLTXLNVSHNALKTFNVAQF 133
>EF519525-1|ABP73588.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L +N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGAIDDRLFQGCHSLTXLNVSHNALKTFNVAQF 133
>EF519519-1|ABP73582.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 685
L + +++ + +G I F G H L +N+S+N LK+ + F
Sbjct: 88 LSDLERLELQQNGLGAIDDRLFQGCHSLTXLNVSHNALKTFNVAQF 133
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 27.9 bits (59), Expect = 0.33
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 548 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFAN 691
LHQ+ + + ++ + + + H+L +NL+ NN+ SL T+AN
Sbjct: 504 LHQLRELDLSSNWLTAVPRDLLLNTHELQRLNLTRNNITSL---TYAN 548
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,740
Number of Sequences: 2352
Number of extensions: 15027
Number of successful extensions: 57
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -