Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18d14
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41535-4|AAB63407.1|  655|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z68009-2|CAA92004.2|  891|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z83217-2|CAB05680.2|  319|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U80438-1|AAB37631.1|  400|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z54235-7|CAA90974.3|  611|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical...    28   5.1  
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z22176-5|CAA80134.1|  278|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.    27   8.9  

>U41535-4|AAB63407.1|  655|Caenorhabditis elegans Hypothetical
           protein F18A1.5 protein.
          Length = 655

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 205 YPEHFNLPVQFGHIYKDGYGDPRSNL--KSPIDLVELHMKTPRNYNESREILK 357
           Y   F L  + G +Y   +GD  + +  KS  +L ELH ++P  YN   E L+
Sbjct: 550 YMMQFELSDETGQVYVTAFGDSAAKIVGKSAAELGELHDESPDEYNAIFERLQ 602


>Z68009-2|CAA92004.2|  891|Caenorhabditis elegans Hypothetical
           protein R09A8.2 protein.
          Length = 891

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
 Frame = +1

Query: 169 DEELPLPKKVNEYPEHFNLP----VQFGHIYKDGYGDPRSNL 282
           D++  L K +N  PE++++P    VQFG  Y DG  +PRS L
Sbjct: 104 DDKAELKKLMNSIPENYSIPILRIVQFGE-YNDG-KEPRSLL 143


>U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical
           protein F49E10.2a protein.
          Length = 790

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 472 VSGKSNGSRSWFDWVSIQQSNIATLKPKQKTVELKSEINRYDHNESNSKIKGQ 630
           ++G  +  + W+  V   Q+ +  L P  K VE K E      NES++KI  Q
Sbjct: 693 LAGSGSTEQPWWQKVQTGQNTLPPLFPVSKRVEEKVEKVSAKPNESDNKIPEQ 745


>U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical
           protein F49E10.2b protein.
          Length = 842

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 472 VSGKSNGSRSWFDWVSIQQSNIATLKPKQKTVELKSEINRYDHNESNSKIKGQ 630
           ++G  +  + W+  V   Q+ +  L P  K VE K E      NES++KI  Q
Sbjct: 693 LAGSGSTEQPWWQKVQTGQNTLPPLFPVSKRVEEKVEKVSAKPNESDNKIPEQ 745


>Z83217-2|CAB05680.2|  319|Caenorhabditis elegans Hypothetical
           protein C10C6.3 protein.
          Length = 319

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 124 EAKRKYPKSIIKTTPDEELPLPKKVNE 204
           E+K+K  K I  T   +E P+PK V+E
Sbjct: 212 ESKKKTEKKIAATQKTQEFPIPKTVDE 238


>U80438-1|AAB37631.1|  400|Caenorhabditis elegans Hypothetical
           protein T19B4.5 protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 322 PRNYNESREILKK-GNKNIQWISKERPRILGSPKDAYIDEKTFRLTDEVDGV 474
           P++Y  + ++++K  NKN+   +++RP+   SP  A I     R  D  DG+
Sbjct: 91  PQSYPHNMDMVQKLQNKNVYMPAQQRPQTRISPAGARIVSFAGRKRDNSDGL 142


>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
           protein AC3.5 protein.
          Length = 1090

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
 Frame = +1

Query: 154 IKTTPDEELPLPKKVNEYPEHFNLPVQFGHIYKDGYGDPRSNLKSPIDLVELHMKT---P 324
           IK    EEL LPK V       +L  + G     G    + N++ P + + L+ K     
Sbjct: 146 IKQPTKEELALPKNVQPVWYDVSLSPKVGGNGTMGLAHVKLNIEEPTNKIVLNAKDIEFT 205

Query: 325 RNYNE---SREILKKGNKNIQWISKERPRI-LGSPKDAYIDEKTFRLTDEVDGVS 477
           RN  +   S+E+ K+  K++   +     +  GS ++A     T   T+    VS
Sbjct: 206 RNLEKIQLSKEVTKRAKKSVDSGTNSTSEMPEGSGEEAMATTATTTTTESTTPVS 260


>Z54235-7|CAA90974.3|  611|Caenorhabditis elegans Hypothetical
           protein C09G9.4 protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +1

Query: 127 AKRKYPKSIIKTTPD-EELPLPKKVNEYPEHFNLPVQFGHIYKDGYGDPRSNLKSPIDLV 303
           ++ + P + I+   D ++L  P   NE+ +  +L VQF + Y D         ++ ++  
Sbjct: 92  SENQAPTNEIQQRSDRQKLQEPIGKNEFIKCMSLVVQFINDYFDESHKQPVIPENDVNSS 151

Query: 304 ELHMKTPRNYNESREILK 357
            +H+K P    E  EILK
Sbjct: 152 RIHVKVPEKAEELTEILK 169


>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
           protein Y47D3A.26 protein.
          Length = 1205

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 427 YIDEKTFRLTDEVDGVSG--KSNGSRSWFDWVSIQQSNIATLKPKQKTVELKSEINRYDH 600
           YIDE+   L +E + +    K + ++   ++     +N   +K K K  E K E+N+ D+
Sbjct: 196 YIDERLQTLENEKEDLKEYQKLDKTKRSVEYTMYDNTNKEAIKEKTKLDEQKVELNQKDN 255

Query: 601 N 603
           N
Sbjct: 256 N 256


>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical protein
            F54B11.3a protein.
          Length = 1111

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +1

Query: 304  ELHMKTPRNYNESREILKKGNKNIQWISKERPRILGSPKDAYIDEKTFRLTDEVDGVSG 480
            EL  K  +NYN   E LK  N NIQ+       I+      Y  +KT ++   ++   G
Sbjct: 888  ELSAKFEQNYNTIIEQLKMENTNIQYDKNHLEAIIRQMIYEYDTDKTGKVDYALESSGG 946


>Z22176-5|CAA80134.1|  278|Caenorhabditis elegans Hypothetical
           protein ZK1098.6 protein.
          Length = 278

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 368 KTFSGLAKNDQEFWVVLRMRT*MKKLLD*QMKSTVSVVK 484
           KTF    +N +E  ++L+ R  +KK +D + K TV   K
Sbjct: 79  KTFDDQNQNSEEMKLILKERDELKKKVDQKSKETVHWTK 117


>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
          Length = 1111

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +1

Query: 304  ELHMKTPRNYNESREILKKGNKNIQWISKERPRILGSPKDAYIDEKTFRLTDEVDGVSG 480
            EL  K  +NYN   E LK  N NIQ+       I+      Y  +KT ++   ++   G
Sbjct: 888  ELSAKFEQNYNTIIEQLKMENTNIQYDKNHLEAIIRQMIYEYDTDKTGKVDYALESSGG 946


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,420,419
Number of Sequences: 27780
Number of extensions: 276047
Number of successful extensions: 857
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)