Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18d11
(586 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL833081-1|CAD89975.1| 341|Homo sapiens hypothetical protein pr... 83 7e-16
AL445493-1|CAH70775.1| 348|Homo sapiens YOD1 OTU deubiquinating... 83 7e-16
AL445493-2|CAH70776.1| 304|Homo sapiens YOD1 OTU deubiquinating... 73 7e-13
AK128014-1|BAC87233.1| 304|Homo sapiens protein ( Homo sapiens ... 71 2e-12
M68864-1|AAA36396.1| 298|Homo sapiens protein ( Human ORF mRNA,... 32 1.3
BC040129-1|AAH40129.1| 297|Homo sapiens LOC51035 protein protein. 32 1.3
BC000902-1|AAH00902.1| 297|Homo sapiens LOC51035 protein protein. 32 1.3
>AL833081-1|CAD89975.1| 341|Homo sapiens hypothetical protein
protein.
Length = 341
Score = 83.0 bits (196), Expect = 7e-16
Identities = 49/145 (33%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
Frame = +3
Query: 147 KIKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSE 326
+ K+K+G VL+ L+S + V EL+ +++I+ I+ IL GYPP+ LD S+ L +
Sbjct: 43 RCKAKDGTHVLQGLSSRTRVRELQGQIAAITGIAPGGQRILVGYPPECLDLSNGDTILED 102
Query: 327 LGLKTGETLIVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCLF 506
L +++G+ LI+EE + T+ + P+ + + P +L + VVP+DNSCLF
Sbjct: 103 LPIQSGDMLIIEE------DQTRPRSSPAFTKRGASSYVRETLP-VLTRTVVPADNSCLF 155
Query: 507 TSIGFVLNGSI-DTSVHTLMRQIIA 578
TS+ +V+ G + + + MR++IA
Sbjct: 156 TSVYYVVEGGVLNPACAPEMRRLIA 180
>AL445493-1|CAH70775.1| 348|Homo sapiens YOD1 OTU deubiquinating
enzyme 1 homolog (S. cerevisiae) protein.
Length = 348
Score = 83.0 bits (196), Expect = 7e-16
Identities = 49/145 (33%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
Frame = +3
Query: 147 KIKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSE 326
+ K+K+G VL+ L+S + V EL+ +++I+ I+ IL GYPP+ LD S+ L +
Sbjct: 50 RCKAKDGTHVLQGLSSRTRVRELQGQIAAITGIAPGGQRILVGYPPECLDLSNGDTILED 109
Query: 327 LGLKTGETLIVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCLF 506
L +++G+ LI+EE + T+ + P+ + + P +L + VVP+DNSCLF
Sbjct: 110 LPIQSGDMLIIEE------DQTRPRSSPAFTKRGASSYVRETLP-VLTRTVVPADNSCLF 162
Query: 507 TSIGFVLNGSI-DTSVHTLMRQIIA 578
TS+ +V+ G + + + MR++IA
Sbjct: 163 TSVYYVVEGGVLNPACAPEMRRLIA 187
>AL445493-2|CAH70776.1| 304|Homo sapiens YOD1 OTU deubiquinating
enzyme 1 homolog (S. cerevisiae) protein.
Length = 304
Score = 72.9 bits (171), Expect = 7e-13
Identities = 44/135 (32%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Frame = +3
Query: 177 LKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSELGLKTGETLI 356
++ L+S + V EL+ +++I+ I+ IL GYPP+ LD S+ L +L +++G+ LI
Sbjct: 16 VEGLSSRTRVRELQGQIAAITGIAPGGQRILVGYPPECLDLSNGDTILEDLPIQSGDMLI 75
Query: 357 VEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCLFTSIGFVLNGS 536
+EE + T+ + P+ + + P +L + VVP+DNSCLFTS+ +V+ G
Sbjct: 76 IEE------DQTRPRSSPAFTKRGASSYVRETLP-VLTRTVVPADNSCLFTSVYYVVEGG 128
Query: 537 I-DTSVHTLMRQIIA 578
+ + + MR++IA
Sbjct: 129 VLNPACAPEMRRLIA 143
>AK128014-1|BAC87233.1| 304|Homo sapiens protein ( Homo sapiens
cDNA FLJ46133 fis, clone TESTI2051742. ).
Length = 304
Score = 71.3 bits (167), Expect = 2e-12
Identities = 43/135 (31%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Frame = +3
Query: 177 LKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSELGLKTGETLI 356
++ L+S + V EL+ +++I+ I+ I GYPP+ LD S+ L +L +++G+ LI
Sbjct: 16 VEGLSSRTRVRELQGQIAAITGIAPGGQRIFVGYPPECLDLSNGDTILEDLPIQSGDMLI 75
Query: 357 VEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCLFTSIGFVLNGS 536
+EE + T+ + P+ + + P +L + VVP+DNSCLFTS+ +V+ G
Sbjct: 76 IEE------DQTRPRSSPAFTKRGASSYVRETLP-VLTRTVVPADNSCLFTSVYYVVEGG 128
Query: 537 I-DTSVHTLMRQIIA 578
+ + + MR++IA
Sbjct: 129 VLNPACAPEMRRLIA 143
>M68864-1|AAA36396.1| 298|Homo sapiens protein ( Human ORF mRNA,
complete cds. ).
Length = 298
Score = 32.3 bits (70), Expect = 1.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 258 VNILCGYPPKALDTSDNSKTLSELGLKTGETLIVEEK 368
V +L G+P +A +D + L ELGL LIV +K
Sbjct: 259 VQLLSGFPRRAFSEADMERPLQELGLVPSAVLIVAKK 295
>BC040129-1|AAH40129.1| 297|Homo sapiens LOC51035 protein protein.
Length = 297
Score = 32.3 bits (70), Expect = 1.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 258 VNILCGYPPKALDTSDNSKTLSELGLKTGETLIVEEK 368
V +L G+P +A +D + L ELGL LIV +K
Sbjct: 258 VQLLSGFPRRAFSEADMERPLQELGLVPSAVLIVAKK 294
>BC000902-1|AAH00902.1| 297|Homo sapiens LOC51035 protein protein.
Length = 297
Score = 32.3 bits (70), Expect = 1.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 258 VNILCGYPPKALDTSDNSKTLSELGLKTGETLIVEEK 368
V +L G+P +A +D + L ELGL LIV +K
Sbjct: 258 VQLLSGFPRRAFSEADMERPLQELGLVPSAVLIVAKK 294
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,311,357
Number of Sequences: 237096
Number of extensions: 1362791
Number of successful extensions: 2445
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2441
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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