Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18d04
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060988-1|AAL28536.2|  230|Drosophila melanogaster GM14633p pro...   201   8e-52
AE014134-2228|AAF53211.1|  211|Drosophila melanogaster CG6153-PA...   201   8e-52
AF143404-1|AAF66635.1|  287|Drosophila melanogaster thioredoxin-...    38   0.013
AY089550-1|AAL90288.1|  287|Drosophila melanogaster LD26837p pro...    36   0.039
AE014296-996|AAF50750.1|  287|Drosophila melanogaster CG5495-PA ...    36   0.039
AY058554-1|AAL13783.1|  455|Drosophila melanogaster LD24746p pro...    29   7.7  
AE013599-3696|AAF47070.1|  455|Drosophila melanogaster CG4735-PA...    29   7.7  

>AY060988-1|AAL28536.2|  230|Drosophila melanogaster GM14633p
           protein.
          Length = 230

 Score =  201 bits (490), Expect = 8e-52
 Identities = 87/139 (62%), Positives = 114/139 (82%)
 Frame = +3

Query: 225 DIGIQYNLHEKIDLDHLECLNESLEGSGKSVFKPWDKRLDRSKFVESDADEELLFNIPFT 404
           ++GI+Y+L+ KIDLD++ECLNE  +G GKSVFKP++KR D SK+VESDADEELLFNIPFT
Sbjct: 43  EMGIEYSLYTKIDLDNVECLNEETDGQGKSVFKPYEKRQDLSKYVESDADEELLFNIPFT 102

Query: 405 GNIKLKGIKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFELQKDTDGILEYCPKI 584
           GNIKLKGI ++  + DSHP+ +++FKNRP MTFDD   +PDQ F+L +D  G +EY PK+
Sbjct: 103 GNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDARAKPDQEFQLTRDARGEIEYSPKV 162

Query: 585 VTFSSVSHLTMHFPRTLGQ 641
           VTFSSV HL+++FP   G+
Sbjct: 163 VTFSSVHHLSLYFPSNFGE 181



 Score = 32.3 bits (70), Expect = 0.63
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +2

Query: 629 NFGAETTKIYYIGLKGE 679
           NFG + T+IYYIGL+GE
Sbjct: 178 NFGEDITRIYYIGLRGE 194


>AE014134-2228|AAF53211.1|  211|Drosophila melanogaster CG6153-PA
           protein.
          Length = 211

 Score =  201 bits (490), Expect = 8e-52
 Identities = 87/139 (62%), Positives = 114/139 (82%)
 Frame = +3

Query: 225 DIGIQYNLHEKIDLDHLECLNESLEGSGKSVFKPWDKRLDRSKFVESDADEELLFNIPFT 404
           ++GI+Y+L+ KIDLD++ECLNE  +G GKSVFKP++KR D SK+VESDADEELLFNIPFT
Sbjct: 24  EMGIEYSLYTKIDLDNVECLNEETDGQGKSVFKPYEKRQDLSKYVESDADEELLFNIPFT 83

Query: 405 GNIKLKGIKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFELQKDTDGILEYCPKI 584
           GNIKLKGI ++  + DSHP+ +++FKNRP MTFDD   +PDQ F+L +D  G +EY PK+
Sbjct: 84  GNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDARAKPDQEFQLTRDARGEIEYSPKV 143

Query: 585 VTFSSVSHLTMHFPRTLGQ 641
           VTFSSV HL+++FP   G+
Sbjct: 144 VTFSSVHHLSLYFPSNFGE 162



 Score = 32.3 bits (70), Expect = 0.63
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +2

Query: 629 NFGAETTKIYYIGLKGE 679
           NFG + T+IYYIGL+GE
Sbjct: 159 NFGEDITRIYYIGLRGE 175


>AF143404-1|AAF66635.1|  287|Drosophila melanogaster
           thioredoxin-like protein TXL protein.
          Length = 287

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
 Frame = +3

Query: 246 LHEKIDLDHLECLNESLEGSGKSVFKPWDKRLDRSKFVESDADEELLFNIPFTGNIKLKG 425
           L+  I     ECLNE+ + + K     W        +++SD DE+L+ +I F   +K++ 
Sbjct: 125 LNTFISKQECECLNEADDHNLKHA---WPSA---GGYLQSDCDEQLILSITFNQAVKIQS 178

Query: 426 IKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFEL---QKDTDGILEYCPKIVTFS 596
           +K  +  +   P  ++LF N+P     D+    + V +L   QK+ +  +    + V F 
Sbjct: 179 LKFKA-PSHLGPKDVKLFINQPRTIDFDMAESMNSVQDLSLAQKELESGVPVNLRYVKFQ 237

Query: 597 SVSHL 611
           +V ++
Sbjct: 238 NVQNI 242


>AY089550-1|AAL90288.1|  287|Drosophila melanogaster LD26837p
           protein.
          Length = 287

 Score = 36.3 bits (80), Expect = 0.039
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
 Frame = +3

Query: 246 LHEKIDLDHLECLNESLEGSGKSVFKPWDKRLDRSKFVESDADEELLFNIPFTGNIKLKG 425
           L+  I     ECLNE+ + + K              +++SD DE+L+ +I F   +K+  
Sbjct: 125 LNTFISKQECECLNEADDHNLKHALA------SAGGYLQSDCDEQLILSITFNQAVKIHS 178

Query: 426 IKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFEL---QKDTDGILEYCPKIVTFS 596
           +K  +  +   P  ++LF N+P     D+    + V +L   QK+ +  +    + V F 
Sbjct: 179 LKFKA-PSHLGPKDVKLFINQPRTIDFDMAESMNSVQDLSLAQKELESGVPVNLRYVKFQ 237

Query: 597 SVSHL 611
           +V ++
Sbjct: 238 NVQNI 242


>AE014296-996|AAF50750.1|  287|Drosophila melanogaster CG5495-PA
           protein.
          Length = 287

 Score = 36.3 bits (80), Expect = 0.039
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
 Frame = +3

Query: 246 LHEKIDLDHLECLNESLEGSGKSVFKPWDKRLDRSKFVESDADEELLFNIPFTGNIKLKG 425
           L+  I     ECLNE+ + + K              +++SD DE+L+ +I F   +K+  
Sbjct: 125 LNTFISKQECECLNEADDHNLKHALA------SAGGYLQSDCDEQLILSITFNQAVKIHS 178

Query: 426 IKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFEL---QKDTDGILEYCPKIVTFS 596
           +K  +  +   P  ++LF N+P     D+    + V +L   QK+ +  +    + V F 
Sbjct: 179 LKFKA-PSHLGPKDVKLFINQPRTIDFDMAESMNSVQDLSLAQKELESGVPVNLRYVKFQ 237

Query: 597 SVSHL 611
           +V ++
Sbjct: 238 NVQNI 242


>AY058554-1|AAL13783.1|  455|Drosophila melanogaster LD24746p
           protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 13/57 (22%), Positives = 27/57 (47%)
 Frame = +3

Query: 258 IDLDHLECLNESLEGSGKSVFKPWDKRLDRSKFVESDADEELLFNIPFTGNIKLKGI 428
           +D D      ++L+  G+ +  PW    D  + + S+ DE +   I  TG++  + +
Sbjct: 44  LDSDSDSDYEDALDVDGEELRSPWTYSFDELRALMSEIDENIYKRITRTGHVDREAV 100


>AE013599-3696|AAF47070.1|  455|Drosophila melanogaster CG4735-PA
           protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 13/57 (22%), Positives = 27/57 (47%)
 Frame = +3

Query: 258 IDLDHLECLNESLEGSGKSVFKPWDKRLDRSKFVESDADEELLFNIPFTGNIKLKGI 428
           +D D      ++L+  G+ +  PW    D  + + S+ DE +   I  TG++  + +
Sbjct: 44  LDSDSDSDYEDALDVDGEELRSPWTYSFDELRALMSEIDENIYKRITRTGHVDREAV 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,592,730
Number of Sequences: 53049
Number of extensions: 575683
Number of successful extensions: 1474
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)