Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18d02
(587 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0076 + 627796-627877,628706-628944,629129-629326,629415-62... 34 0.073
11_01_0075 + 591537-591618,592410-592648,592840-593037,593129-59... 32 0.39
11_02_0146 + 8779249-8780130,8780815-8780970,8781070-8781265,878... 31 0.90
01_01_0595 - 4430738-4430785,4430904-4432679 30 1.2
05_03_0566 - 15521494-15521511,15521550-15521747,15521856-155220... 29 3.6
01_06_1124 - 34679205-34680926,34681438-34682811 29 3.6
11_01_0474 - 3666236-3668050 28 4.8
11_01_0593 - 4705565-4705822,4705916-4706065,4706160-4706307,470... 28 6.3
07_03_0347 + 17036086-17036206,17036548-17037173 28 6.3
10_02_0200 - 6672743-6673717,6676257-6676634,6677017-6677301,667... 27 8.4
09_04_0541 + 18437075-18440062 27 8.4
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 27 8.4
01_07_0112 - 41149461-41151674,41151688-41153265,41154344-411555... 27 8.4
>12_01_0076 +
627796-627877,628706-628944,629129-629326,629415-629474,
629596-629739,631700-631864,632636-632734,633114-633182,
633274-633370,633994-634085,635021-635152,635446-635526,
636284-636400,636497-636598
Length = 558
Score = 34.3 bits (75), Expect = 0.073
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 399 FNKASDKCKDVALSRLSADENSCVKCEKIIDEIFGK 506
F K C+D+AL E++CV C IIDEI K
Sbjct: 131 FCKQYGLCRDMALLSAMKSESTCVFCHHIIDEIMSK 166
>11_01_0075 +
591537-591618,592410-592648,592840-593037,593129-593188,
593313-593456,594655-594819,595611-595709,596057-596125,
596216-596312,596922-597013,597085-597255,598053-598184,
598479-598559,599131-599247,599344-599433
Length = 611
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 399 FNKASDKCKDVALSRLSADENSCVKCEKIIDEIFGK 506
F K C+D+AL E++C+ C IIDEI K
Sbjct: 131 FCKQYGLCRDMALLSAVKSESTCLFCHHIIDEITSK 166
>11_02_0146 +
8779249-8780130,8780815-8780970,8781070-8781265,
8781574-8781599
Length = 419
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +3
Query: 399 FNKASDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAKWDDKYMLGNATRLPNEDLTIL 578
F + D+C+D L D V C K + D DD +LG + + N +L
Sbjct: 234 FVRLDDRCEDYCLHSYYGDCGDQVSCGKYCTRFY--DVHDDDCVLLGGLSNVTNLELITS 291
Query: 579 PK 584
PK
Sbjct: 292 PK 293
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 282 STKSGSEDEAKCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD 428
S +G ED+ A+ KI + P KPI HE+ K+ + S+ C++
Sbjct: 287 SVANGVEDDYARAEASKIQEKPKIPEKPINHEEIKEQVSKKQRSNTCRE 335
>05_03_0566 -
15521494-15521511,15521550-15521747,15521856-15522037,
15522643-15522721
Length = 158
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 399 FNKASDKCKDVALSRLSADENSCVKCEKIIDEI 497
F ++ C V RL E+SC C +++DEI
Sbjct: 111 FCESVSLCHKVTFIRLPRHEDSCDLCHEVVDEI 143
>01_06_1124 - 34679205-34680926,34681438-34682811
Length = 1031
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 183 NPAAFLFRISLADCNTHGKIAKSIAILQSKLQKSTKSGS 299
+P ++RI L CNTHG +A + I+ KL + S S
Sbjct: 951 DPDPVVWRILLGSCNTHGDVAIA-EIVTKKLNELEPSNS 988
>11_01_0474 - 3666236-3668050
Length = 604
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 57 NKKNHIPI-QKENENVVFN*SYTHHF*FRYKMWTAAVRTVNKANPAAFLFRISLADC 224
+K+ + P+ + +++ Y H + + K W + T NK P+ F ++ + C
Sbjct: 393 HKRPYYPVVSTRDSHIICFLVYDHDYCVKEKFWKIMLDTTNKTLPSVFAYKNQSSPC 449
>11_01_0593 -
4705565-4705822,4705916-4706065,4706160-4706307,
4706400-4706479,4706573-4706739,4706830-4707078,
4707161-4707733,4707833-4707972,4708064-4708185,
4708622-4708743,4708877-4709105
Length = 745
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 351 GPNKPIVHEDSKDAHVF--NKASDKCKDVALSRLSADENSCVKCEKI 485
G N+P++H D K +++ K D L+ D S + C +
Sbjct: 510 GNNRPVIHRDVKSSNILISQDFEPKLSDFGLALWDTDATSQITCNDV 556
>07_03_0347 + 17036086-17036206,17036548-17037173
Length = 248
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 213 VKYEIEMPPGSLYLPSSPRRSTFC 142
V ++ PPGS+ ++P RS+FC
Sbjct: 32 VACSVQTPPGSIKKATTPMRSSFC 55
>10_02_0200 -
6672743-6673717,6676257-6676634,6677017-6677301,
6677420-6677570,6677696-6677930,6678689-6678764
Length = 699
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 357 NKPIVHEDSKDAHVF--NKASDKCKDVALSRLSADENS 464
NKPI+H D K +++ + K D LSRL +E +
Sbjct: 56 NKPIIHLDLKPSNILLDDNLLPKIADFGLSRLFGEEQT 93
>09_04_0541 + 18437075-18440062
Length = 995
Score = 27.5 bits (58), Expect = 8.4
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +3
Query: 201 FRISLADCNTHGKIAKSIAILQSKLQKSTKSGSEDEAKCAKCKKIIDLVFGPNKPIVHED 380
F++ + N G ++++ A+LQSKL + + E E+ +C L F NK V +
Sbjct: 299 FKLETDESNWRGCVSRTAAVLQSKLGR--RCIGEKESHGVEC-----LPFPRNKHFVGRE 351
Query: 381 SKDAHV----FNKASDKCKDVALSR--LSADENSCVKCEKIIDE 494
+ + + F +A D +D R ++ E+S + DE
Sbjct: 352 KELSEIEGMFFGRADDAGEDFGCPRGAMTTGESSVGASDGFADE 395
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 255 AILQSKLQKSTKSGSEDEAKCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKDV 431
A+++SK S KS E+ +K + + FG + P V + +DA+ N + + K +
Sbjct: 833 AVMKSKRAPSRKSAEEN----SKADSMANAAFGSDLPTVASEDRDANNGNVKNGRLKSM 887
>01_07_0112 - 41149461-41151674,41151688-41153265,41154344-41155507,
41155807-41156293,41156603-41156759,41157303-41157378
Length = 1891
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 210 KYEIEMPPGSLYLPSSPRRSTFCIETRSDGC 118
K+ I P YLP S ++ IE R DGC
Sbjct: 1468 KFVISNCPKLTYLPESMKKLATLIELRLDGC 1498
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,977,435
Number of Sequences: 37544
Number of extensions: 270346
Number of successful extensions: 757
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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