Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18d02
         (587 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          25   1.4  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    25   1.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.3  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.3  

>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 411 SDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAKWDDKYMLGNATRLPN 560
           S+ CK    + L+ D    +KC K+I +  G +A W       N  +LPN
Sbjct: 87  SNDCKIACKNLLNDDITDDIKCAKLIHKRHGFNA-WYGWKNHCNGKKLPN 135


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 411 SDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAKWDDKYMLGNATRLPN 560
           S+ CK    + L+ D    +KC K+I +  G +A W       N  +LPN
Sbjct: 87  SNDCKIACKNLLNDDITDDIKCAKLIHKRHGFNA-WYGWKNHCNGKKLPN 135


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 414 DKCKDVALSRLSAD 455
           DKCKDVA+ + ++D
Sbjct: 775 DKCKDVAILQYTSD 788


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 45  IVFKNKKNHIPIQKE 89
           I+F N  N +PI KE
Sbjct: 80  IIFDNSDNRVPIDKE 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,781
Number of Sequences: 2352
Number of extensions: 11285
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)