Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18d02
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   3.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   3.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   3.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   3.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.1  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = -3

Query: 279 FVVCFAKSQYFWQFYRVYCSRRVKYEIEMPPGSLYLPS 166
           F+  F  + +   F+R+ C +  K    + P +  LP+
Sbjct: 357 FIYAFYSADFRLAFWRLTCRKCFKSRTNLDPSNRKLPA 394


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 338 DYFLTFSAFSLVFGSALCALL*FALQNRNTFGNFTV 231
           + +  +S F  VFG A C +  FA +   T  N TV
Sbjct: 110 EIYYIWSHFPYVFGEAFCIIQSFAAE---TSANATV 142


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 358 LGPNTKSIIFLHLA 317
           L PN KS+ +LH+A
Sbjct: 515 LNPNEKSLHYLHIA 528


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 14/62 (22%), Positives = 29/62 (46%)
 Frame = +2

Query: 107 QLKLHPSLLVSIQNVDRRGEDGK*SEPGGISISYFTRRLQYTR*NCQKYCDFAKQTTKEH 286
           ++K H ++LV   N+++ G + K       S+   T   Q+T     +    ++   +E+
Sbjct: 188 KIKEHDTVLVV--NIEKSGNESKKYATSSNSLRSRTHDFQHTSSRYSRERSCSRDRNREY 245

Query: 287 KE 292
           KE
Sbjct: 246 KE 247


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 358 LGPNTKSIIFLHLA 317
           L PN KS+ +LH+A
Sbjct: 515 LNPNEKSLHYLHIA 528


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 357 NKPIVHEDSKDAH 395
           N+P+V +DSK+ H
Sbjct: 169 NEPVVLDDSKEEH 181


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,151
Number of Sequences: 438
Number of extensions: 2713
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)