Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18c21
         (578 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015951-1|AAV36836.1| 1553|Drosophila melanogaster SD16632p pro...    29   6.0  
AY050240-1|AAK84939.1| 1331|Drosophila melanogaster SD02490p pro...    29   6.0  
AF289997-1|AAG02462.1| 1340|Drosophila melanogaster thyroid horm...    29   6.0  
AE014296-113|AAN11445.1| 1331|Drosophila melanogaster CG12031-PB...    29   6.0  
AE014296-112|AAF47395.4| 1553|Drosophila melanogaster CG12031-PA...    29   6.0  

>BT015951-1|AAV36836.1| 1553|Drosophila melanogaster SD16632p
           protein.
          Length = 1553

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 84  TAYLGHEKRNSSPWRVVILYCLYDWTEYTELKVLQNDFGEQV-HKRERYCPSLLI 245
           T YL +E+ N   +   +   L DW++   L  L  DF EQ+ +KR   C  L++
Sbjct: 781 TVYLTYEQANYD-FSKTVEDLLNDWSKIVYLYTLVYDFAEQLQNKRLSLCDMLVV 834


>AY050240-1|AAK84939.1| 1331|Drosophila melanogaster SD02490p
           protein.
          Length = 1331

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 84  TAYLGHEKRNSSPWRVVILYCLYDWTEYTELKVLQNDFGEQV-HKRERYCPSLLI 245
           T YL +E+ N   +   +   L DW++   L  L  DF EQ+ +KR   C  L++
Sbjct: 559 TVYLTYEQANYD-FSKTVEDLLNDWSKIVYLYTLVYDFAEQLQNKRLSLCDMLVV 612


>AF289997-1|AAG02462.1| 1340|Drosophila melanogaster thyroid hormone
           receptor-associatedprotein TRAP170 protein.
          Length = 1340

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 84  TAYLGHEKRNSSPWRVVILYCLYDWTEYTELKVLQNDFGEQ-VHKRERYCPSLLI 245
           T YL +E+ N   +   +   L DW++   L  L  DF EQ ++KR   C  L++
Sbjct: 568 TVYLTYEQANYD-FSKTVEDLLNDWSKIVYLYTLVYDFAEQLLNKRLSLCDMLVV 621


>AE014296-113|AAN11445.1| 1331|Drosophila melanogaster CG12031-PB,
           isoform B protein.
          Length = 1331

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 84  TAYLGHEKRNSSPWRVVILYCLYDWTEYTELKVLQNDFGEQ-VHKRERYCPSLLI 245
           T YL +E+ N   +   +   L DW++   L  L  DF EQ ++KR   C  L++
Sbjct: 559 TVYLTYEQANYD-FSKTVEDLLNDWSKIVYLYTLVYDFAEQLLNKRLSLCDMLVV 612


>AE014296-112|AAF47395.4| 1553|Drosophila melanogaster CG12031-PA,
           isoform A protein.
          Length = 1553

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 84  TAYLGHEKRNSSPWRVVILYCLYDWTEYTELKVLQNDFGEQ-VHKRERYCPSLLI 245
           T YL +E+ N   +   +   L DW++   L  L  DF EQ ++KR   C  L++
Sbjct: 781 TVYLTYEQANYD-FSKTVEDLLNDWSKIVYLYTLVYDFAEQLLNKRLSLCDMLVV 834


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,590,814
Number of Sequences: 53049
Number of extensions: 391083
Number of successful extensions: 597
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)