Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18c20
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109126-1|AAI09127.1|  872|Homo sapiens chromosome 10 open read...    34   0.55 
BC036225-1|AAH36225.1|  872|Homo sapiens chromosome 10 open read...    34   0.55 
AL355378-1|CAI15667.1|  872|Homo sapiens novel protein protein.        34   0.55 
AL162742-5|CAI12110.1|  872|Homo sapiens novel protein protein.        34   0.55 
AK093227-1|BAC04102.1|  550|Homo sapiens protein ( Homo sapiens ...    31   2.9  

>BC109126-1|AAI09127.1|  872|Homo sapiens chromosome 10 open reading
           frame 80 protein.
          Length = 872

 Score = 33.9 bits (74), Expect = 0.55
 Identities = 33/143 (23%), Positives = 67/143 (46%)
 Frame = +3

Query: 177 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 356
           FH  K RD  I + S +   ++   ED+K +       E +I D   + AE  I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487

Query: 357 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 536
           + +     S RN+  K L +  +DE+    +K  + I    +Q ++   + S  + A+  
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542

Query: 537 KHLEYKHLDLKHGIKRHQIKRIK 605
            HLE + ++ +    + ++++++
Sbjct: 543 LHLEQQRIEKEKETLKAELQKLR 565


>BC036225-1|AAH36225.1|  872|Homo sapiens chromosome 10 open reading
           frame 80 protein.
          Length = 872

 Score = 33.9 bits (74), Expect = 0.55
 Identities = 33/143 (23%), Positives = 67/143 (46%)
 Frame = +3

Query: 177 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 356
           FH  K RD  I + S +   ++   ED+K +       E +I D   + AE  I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487

Query: 357 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 536
           + +     S RN+  K L +  +DE+    +K  + I    +Q ++   + S  + A+  
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542

Query: 537 KHLEYKHLDLKHGIKRHQIKRIK 605
            HLE + ++ +    + ++++++
Sbjct: 543 LHLEQQRIEKEKETLKAELQKLR 565


>AL355378-1|CAI15667.1|  872|Homo sapiens novel protein protein.
          Length = 872

 Score = 33.9 bits (74), Expect = 0.55
 Identities = 33/143 (23%), Positives = 67/143 (46%)
 Frame = +3

Query: 177 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 356
           FH  K RD  I + S +   ++   ED+K +       E +I D   + AE  I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487

Query: 357 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 536
           + +     S RN+  K L +  +DE+    +K  + I    +Q ++   + S  + A+  
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542

Query: 537 KHLEYKHLDLKHGIKRHQIKRIK 605
            HLE + ++ +    + ++++++
Sbjct: 543 LHLEQQRIEKEKETLKAELQKLR 565


>AL162742-5|CAI12110.1|  872|Homo sapiens novel protein protein.
          Length = 872

 Score = 33.9 bits (74), Expect = 0.55
 Identities = 33/143 (23%), Positives = 67/143 (46%)
 Frame = +3

Query: 177 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 356
           FH  K RD  I + S +   ++   ED+K +       E +I D   + AE  I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487

Query: 357 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 536
           + +     S RN+  K L +  +DE+    +K  + I    +Q ++   + S  + A+  
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542

Query: 537 KHLEYKHLDLKHGIKRHQIKRIK 605
            HLE + ++ +    + ++++++
Sbjct: 543 LHLEQQRIEKEKETLKAELQKLR 565


>AK093227-1|BAC04102.1|  550|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35908 fis, clone TESTI2009935. ).
          Length = 550

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 33/128 (25%), Positives = 58/128 (45%)
 Frame = +3

Query: 177 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 356
           FH  K RD  I + S +   ++   ED+K +       E +I D   + AE  I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487

Query: 357 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 536
           + +     S RN+  K L +  +DE+    +K  + I    +Q ++   + S  + A+  
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542

Query: 537 KHLEYKHL 560
            HLE + +
Sbjct: 543 LHLEQQRI 550


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,825,694
Number of Sequences: 237096
Number of extensions: 1704728
Number of successful extensions: 3082
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3082
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)