Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18c19
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   0.86 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   0.86 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   2.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   3.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.0  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 361 HSTWGIRHSHLRCIRGIPV 305
           H++  +  S LRC+ GIPV
Sbjct: 127 HTSSNLTVSGLRCVNGIPV 145


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 361 HSTWGIRHSHLRCIRGIPV 305
           H++  +  S LRC+ GIPV
Sbjct: 127 HTSSNLTVSGLRCVNGIPV 145


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 361 ARLRCVVEVNGERIVQTRGQPGELFPDK 444
           AR       +G + VQT  +PG+  P+K
Sbjct: 413 ARPPSTPSADGSKPVQTTPKPGQWVPEK 440


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/49 (16%), Positives = 25/49 (51%)
 Frame = -2

Query: 387 YFDDATQSRTARGEFDILIFDVFVAFQCVFRYFWFSTSDSSYEVFPVSD 241
           Y+D  +  R  + +F+I   +  + +     Y + +  + +Y++ P+++
Sbjct: 29  YYDSKSHFRQGQAKFEITDLEPALQYCTHLIYGYAAIDEETYKLTPLNE 77


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 119 KTRQHNINNAPNCFP 75
           K +QHN N  P   P
Sbjct: 232 KNKQHNFNLPPGAIP 246


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 196 QEWSDHYTCH 225
           Q+ + HYTCH
Sbjct: 77  QDHTTHYTCH 86


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 294 YFWFSTSDSSYEVFP 250
           YF  STS S+ E FP
Sbjct: 4   YFTQSTSPSASEAFP 18


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,568
Number of Sequences: 336
Number of extensions: 2654
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)