Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18c19
         (493 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.          32   0.94 
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.            32   0.94 
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.        32   0.94 
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p...    32   0.94 
BX640673-1|CAE45805.1|  648|Homo sapiens hypothetical protein pr...    29   6.6  
BC126307-1|AAI26308.1|  986|Homo sapiens MYOCD protein protein.        29   6.6  
AY764180-1|AAV33439.1|  986|Homo sapiens myocardin protein.            29   6.6  
AK097821-1|BAC05177.1|  684|Homo sapiens protein ( Homo sapiens ...    29   6.6  
AF532596-1|AAN33040.1|  938|Homo sapiens myocardin transcription...    29   6.6  

>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 0.94
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 115 VLPALSAEDVSYQACVDKYSRKGYQP 192
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 0.94
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 115 VLPALSAEDVSYQACVDKYSRKGYQP 192
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 0.94
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 115 VLPALSAEDVSYQACVDKYSRKGYQP 192
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
            protein.
          Length = 1097

 Score = 32.3 bits (70), Expect = 0.94
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 115  VLPALSAEDVSYQACVDKYSRKGYQP 192
            VL AL +E + Y   V KY RKGY+P
Sbjct: 944  VLQALGSEPIQYAVPVVKYDRKGYKP 969


>BX640673-1|CAE45805.1|  648|Homo sapiens hypothetical protein
           protein.
          Length = 648

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 455 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 297
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 108 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 160


>BC126307-1|AAI26308.1|  986|Homo sapiens MYOCD protein protein.
          Length = 986

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 455 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 297
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 403 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 455


>AY764180-1|AAV33439.1|  986|Homo sapiens myocardin protein.
          Length = 986

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 455 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 297
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 403 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 455


>AK097821-1|BAC05177.1|  684|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40502 fis, clone TESTI2045199. ).
          Length = 684

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 455 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 297
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 307 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 359


>AF532596-1|AAN33040.1|  938|Homo sapiens myocardin transcription
           factor protein.
          Length = 938

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 455 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 297
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 403 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 455


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,377,209
Number of Sequences: 237096
Number of extensions: 1743609
Number of successful extensions: 8195
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8195
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)