Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18c12
(615 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058529-1|AAL13758.1| 226|Drosophila melanogaster LD23602p pro... 65 6e-11
AF296281-1|AAG17893.1| 226|Drosophila melanogaster survival mot... 65 6e-11
AE014296-2759|AAF49446.1| 226|Drosophila melanogaster CG16725-P... 65 6e-11
AY069766-1|AAL39911.1| 836|Drosophila melanogaster RE01471p pro... 41 0.002
AE014296-2431|AAF49703.1| 836|Drosophila melanogaster CG13472-P... 41 0.002
AY061350-1|AAL28898.1| 243|Drosophila melanogaster LD28068p pro... 32 0.71
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro... 30 2.9
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 30 2.9
AY069317-1|AAL39462.1| 232|Drosophila melanogaster LD03179p pro... 29 5.0
AE014297-3446|AAF56226.1| 232|Drosophila melanogaster CG5986-PA... 29 5.0
AF145671-1|AAD38646.1| 800|Drosophila melanogaster BcDNA.GH1197... 28 8.7
AE014296-3529|AAF51717.1| 800|Drosophila melanogaster CG6014-PA... 28 8.7
>AY058529-1|AAL13758.1| 226|Drosophila melanogaster LD23602p
protein.
Length = 226
Score = 65.3 bits (152), Expect = 6e-11
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Frame = +2
Query: 173 VWDDKKLNDAYDKALKMANAEVAKRVAMSTNT-EHGNKGKLKGKSRPTSSNKKETE---- 337
VWDD L YD+++ +A +A+R+A STN E N + ++ S+ T
Sbjct: 9 VWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGGATSPEPV 68
Query: 338 -WKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKPSLGNEER 511
+K G RA Y DG++YE ++ + + CV+R+LGYEN + V L L PS G R
Sbjct: 69 SFKVGDYARATYV-DGVDYEGAVVSINEEKGTCVLRYLGYENEQEVLLVDLLPSWGKRVR 127
Query: 512 TRQIEEALQDNGD 550
Q A +D +
Sbjct: 128 REQFLIAKKDEDE 140
>AF296281-1|AAG17893.1| 226|Drosophila melanogaster survival motor
neuron protein SMN protein.
Length = 226
Score = 65.3 bits (152), Expect = 6e-11
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Frame = +2
Query: 173 VWDDKKLNDAYDKALKMANAEVAKRVAMSTNT-EHGNKGKLKGKSRPTSSNKKETE---- 337
VWDD L YD+++ +A +A+R+A STN E N + ++ S+ T
Sbjct: 9 VWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGGATSPEPV 68
Query: 338 -WKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKPSLGNEER 511
+K G RA Y DG++YE ++ + + CV+R+LGYEN + V L L PS G R
Sbjct: 69 SFKVGDYARATYV-DGVDYEGAVVSINEEKGTCVLRYLGYENEQEVLLVDLLPSWGKRVR 127
Query: 512 TRQIEEALQDNGD 550
Q A +D +
Sbjct: 128 REQFLIAKKDEDE 140
>AE014296-2759|AAF49446.1| 226|Drosophila melanogaster CG16725-PA
protein.
Length = 226
Score = 65.3 bits (152), Expect = 6e-11
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Frame = +2
Query: 173 VWDDKKLNDAYDKALKMANAEVAKRVAMSTNT-EHGNKGKLKGKSRPTSSNKKETE---- 337
VWDD L YD+++ +A +A+R+A STN E N + ++ S+ T
Sbjct: 9 VWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGGATSPEPV 68
Query: 338 -WKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKPSLGNEER 511
+K G RA Y DG++YE ++ + + CV+R+LGYEN + V L L PS G R
Sbjct: 69 SFKVGDYARATYV-DGVDYEGAVVSINEEKGTCVLRYLGYENEQEVLLVDLLPSWGKRVR 127
Query: 512 TRQIEEALQDNGD 550
Q A +D +
Sbjct: 128 REQFLIAKKDEDE 140
>AY069766-1|AAL39911.1| 836|Drosophila melanogaster RE01471p
protein.
Length = 836
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/91 (32%), Positives = 41/91 (45%)
Frame = +2
Query: 338 WKAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALKPSLGNEERTR 517
W+ G C A Y DG YEA I V S+ CVV F+GY N E V + P + + R
Sbjct: 732 WQKGDLCMAKYWDDGRYYEAEITGV-SEKTCVVFFMGYGNHEEVLKVDILPI--TDAQNR 788
Query: 518 QIEEALQDNGDDGFGSQSPDLDRMQFGK*QG 610
+ + Q Q P L + Q + +G
Sbjct: 789 PLSNSAQQQ-QPHLQQQQPHLQQQQHSRYRG 818
>AE014296-2431|AAF49703.1| 836|Drosophila melanogaster CG13472-PA
protein.
Length = 836
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/91 (32%), Positives = 41/91 (45%)
Frame = +2
Query: 338 WKAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALKPSLGNEERTR 517
W+ G C A Y DG YEA I V S+ CVV F+GY N E V + P + + R
Sbjct: 732 WQKGDLCMAKYWDDGRYYEAEITGV-SEKTCVVFFMGYGNHEEVLKVDILPI--TDAQNR 788
Query: 518 QIEEALQDNGDDGFGSQSPDLDRMQFGK*QG 610
+ + Q Q P L + Q + +G
Sbjct: 789 PLSNSAQQQ-QPHLQQQQPHLQQQQHSRYRG 818
>AY061350-1|AAL28898.1| 243|Drosophila melanogaster LD28068p
protein.
Length = 243
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 338 WKAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALK 487
WK G C+A ++ D Y+A I + S E V F Y+N +N L+
Sbjct: 92 WKKGDKCQAKWKEDRQYYDATIEDISSTGEVNVIFDAYQNRSTTHVNELR 141
>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p protein.
Length = 1872
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 227 NAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKETE 337
NA+ A+ST KGK GKS + SN KETE
Sbjct: 1125 NAKKPASKAISTKDAKVEKGKETGKSVASKSNGKETE 1161
>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
protein.
Length = 1831
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 227 NAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKETE 337
NA+ A+ST KGK GKS + SN KETE
Sbjct: 1123 NAKKPASKAISTKDAKVEKGKETGKSVASKSNGKETE 1159
>AY069317-1|AAL39462.1| 232|Drosophila melanogaster LD03179p
protein.
Length = 232
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 185 KKLNDAYDKALKMANAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKETEW 340
+K+NDA+++ LK A K V +T++ K K++ KK T W
Sbjct: 154 EKVNDAFEEGLKQAEENKEKGVEEATSSGTKRKSPAVDKTK-AKKKKKGTLW 204
>AE014297-3446|AAF56226.1| 232|Drosophila melanogaster CG5986-PA
protein.
Length = 232
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 185 KKLNDAYDKALKMANAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKETEW 340
+K+NDA+++ LK A K V +T++ K K++ KK T W
Sbjct: 154 EKVNDAFEEGLKQAEENKEKGVEEATSSGTKRKSPAVDKTK-AKKKKKGTLW 204
>AF145671-1|AAD38646.1| 800|Drosophila melanogaster BcDNA.GH11973
protein.
Length = 800
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/51 (23%), Positives = 30/51 (58%)
Frame = +2
Query: 179 DDKKLNDAYDKALKMANAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKE 331
++K+L+D Y + +++AN E K++A + + + KL+ + + ++E
Sbjct: 562 EEKRLHDLYAERIRLANTEREKQLAEAHEAKRLEELKLQEQLKKQEDERQE 612
>AE014296-3529|AAF51717.1| 800|Drosophila melanogaster CG6014-PA
protein.
Length = 800
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/51 (23%), Positives = 30/51 (58%)
Frame = +2
Query: 179 DDKKLNDAYDKALKMANAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKE 331
++K+L+D Y + +++AN E K++A + + + KL+ + + ++E
Sbjct: 562 EEKRLHDLYAERIRLANTEREKQLAEAHEAKRLEELKLQEQLKKQEDERQE 612
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,052,555
Number of Sequences: 53049
Number of extensions: 386009
Number of successful extensions: 1188
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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