Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18c03
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL589765-12|CAI17173.2|   66|Homo sapiens ornithine decarboxylas...    33   1.2  
AB209253-1|BAD92490.1|  458|Homo sapiens two pore segment channe...    31   4.7  
BC033142-1|AAH33142.2|  464|Homo sapiens C20orf151 protein protein.    30   8.3  
BC006450-1|AAH06450.1|  464|Homo sapiens C20orf151 protein protein.    30   8.3  
AL121832-6|CAI23285.1|  664|Homo sapiens chromosome 20 open read...    30   8.3  
AK128718-1|BAC87589.1|  410|Homo sapiens protein ( Homo sapiens ...    30   8.3  
AK074919-1|BAC11293.1|  664|Homo sapiens protein ( Homo sapiens ...    30   8.3  

>AL589765-12|CAI17173.2|   66|Homo sapiens ornithine decarboxylase
           antizyme 3 protein.
          Length = 66

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 417 ALWSMRALRSVSIPLPVWSMRALWALPIPGPL 512
           A W++R    +++P   W+M +LW +P+ G L
Sbjct: 14  ATWALRWSDQITLPSLPWTMSSLWCIPLKGML 45


>AB209253-1|BAD92490.1|  458|Homo sapiens two pore segment channel 2
           variant protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +3

Query: 348 MSMWSLWAVRSVPWTVSSVRAMRALWSMRALRSVSIPLPVWSMRALWALPIPGPLWSLWS 527
           +S+W +  + ++      +R + ++  M  + S  + L V +MRA   + +PGP   L +
Sbjct: 385 LSLWDMTRMLNMLIVFRFLRIIPSMKPMAVVASTVLGL-VQNMRAFGGILVPGPCQWLGA 443

Query: 528 LWSVR 542
           LW +R
Sbjct: 444 LWELR 448


>BC033142-1|AAH33142.2|  464|Homo sapiens C20orf151 protein protein.
          Length = 464

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 495 PIPGPLWSLWSLWSVRTLRTMRPLPKPVPMPMSKP 599
           P+PG   SL S  S     T RPLP P P P   P
Sbjct: 315 PLPGSQLSLSSPGSTEDEDTGRPLPPPHPQPPPHP 349


>BC006450-1|AAH06450.1|  464|Homo sapiens C20orf151 protein protein.
          Length = 464

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 495 PIPGPLWSLWSLWSVRTLRTMRPLPKPVPMPMSKP 599
           P+PG   SL S  S     T RPLP P P P   P
Sbjct: 315 PLPGSQLSLSSPGSTEDEDTGRPLPPPHPQPPPHP 349


>AL121832-6|CAI23285.1|  664|Homo sapiens chromosome 20 open reading
           frame 151 protein.
          Length = 664

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 495 PIPGPLWSLWSLWSVRTLRTMRPLPKPVPMPMSKP 599
           P+PG   SL S  S     T RPLP P P P   P
Sbjct: 515 PLPGSQLSLSSPGSTEDEDTGRPLPPPHPQPPPHP 549


>AK128718-1|BAC87589.1|  410|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46885 fis, clone UTERU3016274. ).
          Length = 410

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 495 PIPGPLWSLWSLWSVRTLRTMRPLPKPVPMPMSKP 599
           P+PG   SL S  S     T RPLP P P P   P
Sbjct: 299 PLPGSQLSLSSPGSTEDEDTGRPLPPPHPQPPPHP 333


>AK074919-1|BAC11293.1|  664|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90438 fis, clone NT2RP3000871. ).
          Length = 664

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 495 PIPGPLWSLWSLWSVRTLRTMRPLPKPVPMPMSKP 599
           P+PG   SL S  S     T RPLP P P P   P
Sbjct: 515 PLPGSQLSLSSPGSTEDEDTGRPLPPPHPQPPPHP 549


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,935,075
Number of Sequences: 237096
Number of extensions: 1489133
Number of successful extensions: 4780
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4738
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)