Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18b20
         (585 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2410|ABC67186.1|  139|Drosophila melanogaster CG34015-P...    71   2e-12
BT024403-1|ABC86465.1|  166|Drosophila melanogaster IP04530p pro...    57   2e-08
AE014134-319|AAF51322.1|  168|Drosophila melanogaster CG15362-PA...    57   2e-08
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    35   0.093
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    35   0.093
AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    33   0.22 
M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    33   0.38 
AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p pro...    32   0.66 
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    31   1.1  

>AE014298-2410|ABC67186.1|  139|Drosophila melanogaster CG34015-PA
           protein.
          Length = 139

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 28/66 (42%), Positives = 47/66 (71%)
 Frame = +1

Query: 217 ESIINRMMSISRELLSKNNLSIEDARFGYHWPPFRSVKHLHLHTIAPESEMGFIGRVIFK 396
           +S++  M +  ++LL    +S++DA FG+H PPF +VKHLH+H I+P ++M F+ ++IF+
Sbjct: 61  DSLVQLMENALKDLLVSKGVSVDDALFGFHLPPFITVKHLHMHAISPRTQMTFLSKMIFR 120

Query: 397 KNSYWF 414
             S WF
Sbjct: 121 P-SVWF 125


>BT024403-1|ABC86465.1|  166|Drosophila melanogaster IP04530p
           protein.
          Length = 166

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +1

Query: 223 IINRMMSISRELLSKNNLSIEDARFGYHWPPFRSVKHLHLHTIAPESEMGFIGRVIFKKN 402
           ++ RM     E L   N+  ++A  G+H PPF SV+HLHLH I P ++M F  ++ F   
Sbjct: 89  LVRRMEQGMMEFLRSQNVDPKEAIVGFHLPPFISVRHLHLHGIFPPADMSFGNKISFMP- 147

Query: 403 SYWF 414
           S+WF
Sbjct: 148 SFWF 151


>AE014134-319|AAF51322.1|  168|Drosophila melanogaster CG15362-PA
           protein.
          Length = 168

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +1

Query: 223 IINRMMSISRELLSKNNLSIEDARFGYHWPPFRSVKHLHLHTIAPESEMGFIGRVIFKKN 402
           ++ RM     E L   N+  ++A  G+H PPF SV+HLHLH I P ++M F  ++ F   
Sbjct: 91  LVRRMEQGMMEFLRSQNVDPKEAIVGFHLPPFISVRHLHLHGIFPPADMSFGNKISFMP- 149

Query: 403 SYWF 414
           S+WF
Sbjct: 150 SFWF 153


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 34.7 bits (76), Expect = 0.093
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +1

Query: 154 RIAVGAPWFIRNVDLHDDLDLESII 228
           RI  GAPW++RN ++H DL ++ +I
Sbjct: 821 RIITGAPWYLRNENIHRDLKIKLVI 845


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 34.7 bits (76), Expect = 0.093
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +1

Query: 154 RIAVGAPWFIRNVDLHDDLDLESII 228
           RI  GAPW++RN ++H DL ++ +I
Sbjct: 821 RIITGAPWYLRNENIHRDLKIKLVI 845


>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 151 ARIAVGAPWFIRNVDLHDDLDLESIINRM 237
           AR+  G  WF+RN  LH DL L ++ + +
Sbjct: 829 ARLITGCEWFVRNTTLHRDLKLATVFDEI 857


>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +1

Query: 154 RIAVGAPWFIRNVDLHDDLDLESIINRMMSISRELL 261
           R   GAPW++R+ ++  DL++ S+ N +  +  + L
Sbjct: 823 RTITGAPWYVRSENIQRDLNIPSVTNAITELKEKYL 858


>AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p
           protein.
          Length = 718

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +1

Query: 166 GAPWFIRNVDLHDDLDLESIINRMMSISRELLSKNNL 276
           GAPW++R  D+  DL +  + +++ +I+++ L + N+
Sbjct: 641 GAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNV 677


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
           D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 10/37 (27%), Positives = 25/37 (67%)
 Frame = +1

Query: 166 GAPWFIRNVDLHDDLDLESIINRMMSISRELLSKNNL 276
           GAPW++R  D+  DL +  + +++ +I+++ + + N+
Sbjct: 839 GAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNV 875


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,868,702
Number of Sequences: 53049
Number of extensions: 511590
Number of successful extensions: 1052
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)