Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18b17
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78418-1|CAB01696.1| 245|Caenorhabditis elegans Hypothetical pr... 175 2e-44
U00036-12|AAK29854.2| 237|Caenorhabditis elegans Hypothetical p... 80 1e-15
AF143152-1|AAD37863.1| 237|Caenorhabditis elegans putative NADH... 80 1e-15
Z81030-14|CAJ43441.1| 75|Caenorhabditis elegans Hypothetical p... 31 0.84
Z49909-3|CAA90107.2| 603|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ... 28 4.5
Z83238-7|CAB05797.1| 313|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical pr... 28 5.9
>Z78418-1|CAB01696.1| 245|Caenorhabditis elegans Hypothetical
protein F25D7.1 protein.
Length = 245
Score = 175 bits (427), Expect = 2e-44
Identities = 70/137 (51%), Positives = 98/137 (71%)
Frame = +2
Query: 197 GVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALFYYPINPGTG 376
G+P TRYW + ++ L G+FG ++ + L + N+FQ WRPLTAL YYP+ P TG
Sbjct: 9 GIPIVTRYWFLASTIIPLLGRFGFINVQWMFLQWDLVVNKFQFWRPLTALIYYPVTPQTG 68
Query: 377 FHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMVLSV 556
FH+L+ CYFLYNYS+ LE+ + G+ ADY +ML+FNW C + + + + L++PMV+SV
Sbjct: 69 FHWLMMCYFLYNYSKALESETYRGRSADYLFMLIFNWFFCSGLCMALDIYFLLEPMVISV 128
Query: 557 LYVWCQLNQDVIVSFWF 607
LYVWCQ+N+D IVSFWF
Sbjct: 129 LYVWCQVNKDTIVSFWF 145
>U00036-12|AAK29854.2| 237|Caenorhabditis elegans Hypothetical
protein R151.6 protein.
Length = 237
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/135 (27%), Positives = 70/135 (51%)
Frame = +2
Query: 200 VPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALFYYPINPGTGF 379
+P TR++ ++L+ V+P++ ++ ++Q WR +T+ ++ GF
Sbjct: 11 MPPVTRFYTGACVLLTTAVHLEFVTPFHLYFNWELIIRKYQFWRLITSFCFFG---SFGF 67
Query: 380 HFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMVLSVL 559
FL N F Y Y LE G F G+ AD+ YM LF V ++ G+ V++ L + ++
Sbjct: 68 SFLFNMIFTYRYCMMLEEGSFRGRRADFVYMFLFGAVLMILSGIFVQILFLGQAFTIMLV 127
Query: 560 YVWCQLNQDVIVSFW 604
Y+W + N + ++F+
Sbjct: 128 YIWSRRNPMIQMNFF 142
>AF143152-1|AAD37863.1| 237|Caenorhabditis elegans putative NADH
oxidoreductase complexI subunit protein.
Length = 237
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/135 (27%), Positives = 70/135 (51%)
Frame = +2
Query: 200 VPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALFYYPINPGTGF 379
+P TR++ ++L+ V+P++ ++ ++Q WR +T+ ++ GF
Sbjct: 11 MPPVTRFYTGACVLLTTAVHLEFVTPFHLYFNWELIIRKYQFWRLITSFCFFG---SFGF 67
Query: 380 HFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMVLSVL 559
FL N F Y Y LE G F G+ AD+ YM LF V ++ G+ V++ L + ++
Sbjct: 68 SFLFNMIFTYRYCMMLEEGSFRGRRADFVYMFLFGAVLMILSGIFVQILFLGQAFTIMLV 127
Query: 560 YVWCQLNQDVIVSFW 604
Y+W + N + ++F+
Sbjct: 128 YIWSRRNPMIQMNFF 142
>Z81030-14|CAJ43441.1| 75|Caenorhabditis elegans Hypothetical
protein C01G10.17 protein.
Length = 75
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 233 TIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALFYYPINPGTGFHFLINC 397
T++ +L F YY +YY N + T +YYP N G+++ C
Sbjct: 5 TLIATLLVLFAATDAYYTY--YYYPNNNYNNNNGYTTYYYYPNNNNNGYYYNNGC 57
>Z49909-3|CAA90107.2| 603|Caenorhabditis elegans Hypothetical
protein C14A4.3 protein.
Length = 603
Score = 28.3 bits (60), Expect = 4.5
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = +2
Query: 326 WRPLTALFYYPINPGTGFHFLINCYFL 406
W+P+ +L + ++ TGFH L+ +++
Sbjct: 556 WKPVDSLPFIDVSKSTGFHGLLRAFYV 582
>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
protein H04J21.1 protein.
Length = 1032
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 271 HKPKFTKQTQYNSKSHPISGEKRYTIVPISEF 176
H P+++ T +S SHP++ +R TI +S+F
Sbjct: 124 HSPQYSPDTSISSSSHPLN--RRATIDELSKF 153
>Z83238-7|CAB05797.1| 313|Caenorhabditis elegans Hypothetical
protein T08G3.8 protein.
Length = 313
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +2
Query: 293 DFYYFFNQFQIWRPLTALFYYPINPGTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYM 472
DF+Y FN++ ++ +T ++ P ++ YFLY ++ T + P +
Sbjct: 6 DFHYEFNRYSLFAIVTGIYSMPT---VYILIKLSYYFLYRKNKCYSTDL---HPVLFRQF 59
Query: 473 LLFNWVCCVIIGLLVKLPVLMDPMVLSVLYVWCQL-NQDVIVSF 601
++ C + +K + P+ V+ WC + N ++ F
Sbjct: 60 MIMQIAC--FFNVCIKFLIFRIPLT-GVMTEWCAVTNPSGVLDF 100
>Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical
protein ZK1251.8 protein.
Length = 568
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 458 DYFYMLLFNWVCCVIIGLLVKLPVLMDPMVLSVLYV 565
D+F L FN+V IGL +P D ++++++Y+
Sbjct: 342 DFFKALYFNFVTLTTIGLGDFVPKSFDYLLITLIYI 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,469,225
Number of Sequences: 27780
Number of extensions: 321510
Number of successful extensions: 1011
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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