Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18b17
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   4.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.4  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 69  KKINENSEKPIFMTLYCVIINQFVPTK*SENL 164
           K  N  +  P+F T++ + I + +P +  ENL
Sbjct: 312 KAKNMENRFPLFTTVHRICIGETMPMELIENL 343


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = -1

Query: 268 KPKFTKQTQYNSKSHPISGEKRYTIVPISEFRHFPRFSDYFVG 140
           +P F+    Y     P   +K   ++ ++E   F +   +FVG
Sbjct: 33  QPSFSVHQVYPENLIPRLAKKAIQVLGVTEKEFFDQMGVHFVG 75


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 171 IFQDFLIISLAQTDL 127
           I Q+F I+SLA  DL
Sbjct: 69  IVQNFFIVSLAVADL 83


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 171 IFQDFLIISLAQTDL 127
           I Q+F I+SLA  DL
Sbjct: 69  IVQNFFIVSLAVADL 83


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 171 IFQDFLIISLAQTDL 127
           I Q+F I+SLA  DL
Sbjct: 69  IVQNFFIVSLAVADL 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,455
Number of Sequences: 438
Number of extensions: 4153
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)