Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18b11
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 91 4e-19
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 91 4e-19
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 91 6e-19
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 89 2e-18
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 80 9e-16
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 67 7e-12
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 45 4e-05
AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical ... 36 0.019
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z72502-11|CAH19081.1| 484|Caenorhabditis elegans Hypothetical p... 30 0.95
Z72502-10|CAA96587.1| 447|Caenorhabditis elegans Hypothetical p... 30 0.95
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 29 2.2
Z81111-2|CAB03266.1| 535|Caenorhabditis elegans Hypothetical pr... 27 6.7
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/97 (43%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Frame = +3
Query: 243 MSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWI 416
++ K ++ GD P P SG +R++ MR+CP+A+R ++ + K IP +++ I+LDQKP+W
Sbjct: 7 LNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWF 66
Query: 417 FNFSPKGTVPALEYEPGKAL-FDSNIINVYLDEKYPE 524
F KG VPALE++ GK + +S +I YLD+ YPE
Sbjct: 67 FTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPE 103
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/97 (43%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Frame = +3
Query: 243 MSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWI 416
++ K ++ GD P P SG +R++ MR+CP+A+R ++ + K IP +++ I+LDQKP+W
Sbjct: 290 LNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWF 349
Query: 417 FNFSPKGTVPALEYEPGKAL-FDSNIINVYLDEKYPE 524
F KG VPALE++ GK + +S +I YLD+ YPE
Sbjct: 350 FTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPE 386
Score = 67.3 bits (157), Expect = 7e-12
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 324 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKA-LFDSNIINV 500
P A+R ++ + KNIP D++ ++L +KP+W F+ KG VP LE++ GK + +S +I
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPE 87
Query: 501 YLDEKYPEIPLQASD 545
YLD+ YPE + +D
Sbjct: 88 YLDDIYPETRILPTD 102
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 90.6 bits (215), Expect = 6e-19
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +3
Query: 243 MSEKHLQTGDVLPPYSGK--LRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWI 416
++ K L+TGD+ PP R+++MRFCP A+R ++ + K IP +++ INL QKP+W
Sbjct: 7 INSKALKTGDLPPPSPSPNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWY 66
Query: 417 FNFSPKGTVPALEYEPGKAL-FDSNIINVYLDEKYPEIPLQASD 545
F + KG VP LE+ GK L +S +I YLD+ +PE + SD
Sbjct: 67 FTKNYKGQVPTLEHAEGKKLVIESAVIPEYLDDIFPETKILPSD 110
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 89.0 bits (211), Expect = 2e-18
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +3
Query: 258 LQTGDVLPPYS-GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPK 434
L G + PP + G R+++MRFCPYA+R ++ L KNIP ++V +N D+ P W SP
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNIPVEVVNVNPDRSPNWYLPKSPI 144
Query: 435 GTVPALEYEPGKALFDSNIINVYLDEKYP 521
G VPALE GK +++SN+I YLDE +P
Sbjct: 145 GRVPALEIN-GKVVWESNVIVEYLDELFP 172
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 80.2 bits (189), Expect = 9e-16
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Frame = +3
Query: 243 MSEKHLQTGDVLPPYS-GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIF 419
++ K ++ GD PP S G RV+ MRFCP+AER +L + AK I ++V +N+ K EW +
Sbjct: 6 VTSKAIRKGDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEVVNLNVTDKLEWYW 65
Query: 420 NFSPKGTVPALEYEPGKALFDSNIINVYLDEKYPEIPLQASD 545
+G PA+E+ GK + +S I YLD+ +PE + +D
Sbjct: 66 TKHYQGKAPAVEHN-GKVVIESGFIPEYLDDAFPETRILPTD 106
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 67.3 bits (157), Expect = 7e-12
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 324 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKA-LFDSNIINV 500
P A+R ++ + KNIP D++ ++L +KP+W F+ KG VP LE++ GK + +S +I
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPE 87
Query: 501 YLDEKYPEIPLQASD 545
YLD+ YPE + +D
Sbjct: 88 YLDDIYPETRILPTD 102
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 258 LQTGDVLPPYS-GKLRVFAMRFCPYAERTVLTLNAKNIP 371
L G + PP + G R+++MRFCPYA+R ++ L KNIP
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNIP 123
>AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical
protein Y53G8B.1 protein.
Length = 213
Score = 35.9 bits (79), Expect = 0.019
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 321 CPYAERTVLTLNAKNIPYDLVFINL--DQKPEWIFNFSPKGTVPALEYEPGKALFDSNII 494
C RT L L K I Y+ +NL QK + +P VP L+ G L +S I
Sbjct: 15 CSSRVRTALAL--KKIDYEYQPVNLLNKQKEQEFHGNNPAEKVPILKIN-GLTLTESMAI 71
Query: 495 NVYLDEKYPEIPL 533
YLDE YP+ PL
Sbjct: 72 IEYLDEIYPDPPL 84
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 33.9 bits (74), Expect = 0.077
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 321 CPYAERTVLTLNAKNIPYDLVFINL--DQKPEWIFNFSPKGTVPALEYEPGKALFDSNII 494
C + R L L KN+ Y+ ++L ++ + +P VP + G+ + +S I
Sbjct: 16 CSWRVRIALAL--KNVDYEYKTVDLLSEEAKSKLKEINPAAKVPTFVVD-GQVITESLAI 72
Query: 495 NVYLDEKYPEIPLQASD 545
YL+E +P++PL D
Sbjct: 73 IEYLEETHPDVPLLPKD 89
>Z72502-11|CAH19081.1| 484|Caenorhabditis elegans Hypothetical
protein C08B6.4b protein.
Length = 484
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +3
Query: 279 PPYSGKLRVFAMRFCPYAERTV---LTLNAKN--IPYDLVFINLDQKPEW 413
P S +++ F FC Y + TL+ KN +P D +F NL +P+W
Sbjct: 370 PGESRRIKAFKW-FCGYFDTPTGPEATLSCKNMPVPLDQIFYNLSYQPDW 418
>Z72502-10|CAA96587.1| 447|Caenorhabditis elegans Hypothetical
protein C08B6.4a protein.
Length = 447
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +3
Query: 279 PPYSGKLRVFAMRFCPYAERTV---LTLNAKN--IPYDLVFINLDQKPEW 413
P S +++ F FC Y + TL+ KN +P D +F NL +P+W
Sbjct: 333 PGESRRIKAFKW-FCGYFDTPTGPEATLSCKNMPVPLDQIFYNLSYQPDW 381
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 330 AERTVLTLNAKNIPYDLVFINL---DQKPEWIF-NFSPKGTVPALEYEPGKALFDSNIIN 497
A R + L KNI Y+ I+L + K F +P VP L G +L +S I
Sbjct: 15 AWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTLVIN-GLSLTESLAII 73
Query: 498 VYLDEKYPEIP 530
YLDE YP+ P
Sbjct: 74 EYLDEAYPDPP 84
>Z81111-2|CAB03266.1| 535|Caenorhabditis elegans Hypothetical
protein T01G5.2 protein.
Length = 535
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 7 LNIFESSFNSFLELVLVVSTILVFL 81
LN+F+ SF L++VVS+I V L
Sbjct: 489 LNVFQKSFIDIYTLIIVVSSIFVAL 513
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,679,335
Number of Sequences: 27780
Number of extensions: 228208
Number of successful extensions: 566
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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