Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18b06
(612 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089689-1|AAL90427.1| 160|Drosophila melanogaster RH65975p pro... 165 5e-41
AE014296-1238|AAF50575.1| 160|Drosophila melanogaster CG4457-PA... 165 5e-41
U35682-1|AAA79181.1| 163|Drosophila melanogaster signal recogni... 143 2e-34
BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p pro... 30 2.1
AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA... 30 2.1
U15803-1|AAC36490.1| 674|Drosophila melanogaster InaD protein. 29 4.9
L27653-1|AAA62385.1| 787|Drosophila melanogaster phosphofructok... 29 4.9
BT004473-1|AAO42637.1| 674|Drosophila melanogaster RH58949p pro... 29 4.9
AF245280-1|AAF81203.1| 674|Drosophila melanogaster INAD protein. 29 4.9
AE013599-3488|AAF46915.1| 674|Drosophila melanogaster CG3504-PA... 29 4.9
AY071235-1|AAL48857.1| 134|Drosophila melanogaster RE27042p pro... 29 6.5
AE014296-1747|AAF50202.1| 134|Drosophila melanogaster CG6736-PA... 29 6.5
>AY089689-1|AAL90427.1| 160|Drosophila melanogaster RH65975p
protein.
Length = 160
Score = 165 bits (400), Expect = 5e-41
Identities = 77/133 (57%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Frame = +3
Query: 219 MITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGL 398
M +W+P KH+D+ERWICIYPAY+N KKT EGRRLPK CV+NP++ EIRDVL + L
Sbjct: 7 MKKNWSPSMKHNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNL 66
Query: 399 RVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQ 578
+ +ENK Y RE S EM +RGR+RVQ++N DG N +FPTRES+M +I IP+LKTRQ
Sbjct: 67 QFLMENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQ 126
Query: 579 NR---PVEQQPQP 608
N+ QQ QP
Sbjct: 127 NKSGDSYHQQSQP 139
>AE014296-1238|AAF50575.1| 160|Drosophila melanogaster CG4457-PA
protein.
Length = 160
Score = 165 bits (400), Expect = 5e-41
Identities = 77/133 (57%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Frame = +3
Query: 219 MITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGL 398
M +W+P KH+D+ERWICIYPAY+N KKT EGRRLPK CV+NP++ EIRDVL + L
Sbjct: 7 MKKNWSPSMKHNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNL 66
Query: 399 RVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQ 578
+ +ENK Y RE S EM +RGR+RVQ++N DG N +FPTRES+M +I IP+LKTRQ
Sbjct: 67 QFLMENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQ 126
Query: 579 NR---PVEQQPQP 608
N+ QQ QP
Sbjct: 127 NKSGDSYHQQSQP 139
>U35682-1|AAA79181.1| 163|Drosophila melanogaster signal
recognition particle 19kDa protein protein.
Length = 163
Score = 143 bits (346), Expect = 2e-34
Identities = 68/118 (57%), Positives = 85/118 (72%), Gaps = 3/118 (2%)
Frame = +3
Query: 264 RWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGLRVGVENKLYSRECSK 443
RWICIYPAY+N KKT EGRRLPK CV+NP++ EIRD + + L+ +ENK Y RE S
Sbjct: 25 RWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDAVSVSNLQFLMENKKYCRENSS 84
Query: 444 EMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQNR---PVEQQPQP 608
EM +RGR+RVQ++N DG N +FPTRES+M +I IP+LKTRQN+ QQ QP
Sbjct: 85 EMEFRGRVRVQLRNVDGTLYNIDFPTRESIMLHIASKIPQLKTRQNKSGDSYHQQSQP 142
>BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p
protein.
Length = 1411
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +3
Query: 375 DVLLATGLRVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGES 554
D L++ +++ ++ +LY RE E++ + R+ + +D+G P+ P R+ K ++
Sbjct: 569 DKLISEDIKIELDKQLYQRESPVEVISKLVARISMIDDNG-PILPSNCVRQIQQKL--QN 625
Query: 555 IPKLK 569
IP L+
Sbjct: 626 IPNLE 630
>AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA
protein.
Length = 1411
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +3
Query: 375 DVLLATGLRVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGES 554
D L++ +++ ++ +LY RE E++ + R+ + +D+G P+ P R+ K ++
Sbjct: 569 DKLISEDIKIELDKQLYQRESPVEVISKLVARISMIDDNG-PILPSNCVRQIQQKL--QN 625
Query: 555 IPKLK 569
IP L+
Sbjct: 626 IPNLE 630
>U15803-1|AAC36490.1| 674|Drosophila melanogaster InaD protein.
Length = 674
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 483 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 584
ND+G V P +FPT K+I + PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370
>L27653-1|AAA62385.1| 787|Drosophila melanogaster
phosphofructokinase protein.
Length = 787
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 252 SDVERWICIYPAYLNSKKTLAEGR 323
SDV W+ AYL SK+TL EG+
Sbjct: 463 SDVSGWVGQGGAYLGSKRTLPEGK 486
>BT004473-1|AAO42637.1| 674|Drosophila melanogaster RH58949p
protein.
Length = 674
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 483 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 584
ND+G V P +FPT K+I + PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370
>AF245280-1|AAF81203.1| 674|Drosophila melanogaster INAD protein.
Length = 674
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 483 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 584
ND+G V P +FPT K+I + PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370
>AE013599-3488|AAF46915.1| 674|Drosophila melanogaster CG3504-PA
protein.
Length = 674
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 483 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 584
ND+G V P +FPT K+I + PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370
>AY071235-1|AAL48857.1| 134|Drosophila melanogaster RE27042p
protein.
Length = 134
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 183 RKFQTK*LDMASMITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTH 362
RK Q D+ + ++KH+D + + PA + +K RR+ C E T+
Sbjct: 67 RKLQQPDEDIEQETETGRLKQKHTDADTEKGVPPAVGSGRKLRRHRRRIAHECCKEGCTY 126
Query: 363 QEIRD 377
+I D
Sbjct: 127 DDILD 131
>AE014296-1747|AAF50202.1| 134|Drosophila melanogaster CG6736-PA
protein.
Length = 134
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 183 RKFQTK*LDMASMITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTH 362
RK Q D+ + ++KH+D + + PA + +K RR+ C E T+
Sbjct: 67 RKLQQPDEDIEQETETGRLKQKHTDADTEKGVPPAVGSGRKLRRHRRRIAHECCKEGCTY 126
Query: 363 QEIRD 377
+I D
Sbjct: 127 DDILD 131
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,030,006
Number of Sequences: 53049
Number of extensions: 539319
Number of successful extensions: 1336
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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