Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18a23
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075174-1|AAL68044.1|  381|Drosophila melanogaster AT07283p pro...    35   0.081
AE014297-1079|AAF54486.2|  381|Drosophila melanogaster CG12812-P...    35   0.081
AE014296-3452|AAS65079.1| 1067|Drosophila melanogaster CG33287-P...    28   9.3  

>AY075174-1|AAL68044.1|  381|Drosophila melanogaster AT07283p
           protein.
          Length = 381

 Score = 35.1 bits (77), Expect = 0.081
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +3

Query: 378 NFRQHVICVEYKSYQKLLVKSTQLPHAGSL----EREYNNLDEIVTTFREFILDLTPYFH 545
           +F QH + ++  S   LL+    LP   SL     +   NL+E +  FR+ + DL P++ 
Sbjct: 142 DFEQHYLELKIPS---LLLLDHSLPDCVSLGEMLTKSAGNLEEALNLFRKLLEDLRPFYD 198

Query: 546 QLELIDRNCTVKEPRNPSFKDDYR 617
               ID  C V +P   S K   R
Sbjct: 199 NFMDIDELCHVLQPSPISSKHKTR 222


>AE014297-1079|AAF54486.2|  381|Drosophila melanogaster CG12812-PA
           protein.
          Length = 381

 Score = 35.1 bits (77), Expect = 0.081
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +3

Query: 378 NFRQHVICVEYKSYQKLLVKSTQLPHAGSL----EREYNNLDEIVTTFREFILDLTPYFH 545
           +F QH + ++  S   LL+    LP   SL     +   NL+E +  FR+ + DL P++ 
Sbjct: 142 DFEQHYLELKIPS---LLLLDHSLPDCVSLGEMLTKSAGNLEEALNLFRKLLEDLRPFYD 198

Query: 546 QLELIDRNCTVKEPRNPSFKDDYR 617
               ID  C V +P   S K   R
Sbjct: 199 NFMDIDELCHVLQPSPISSKHKTR 222


>AE014296-3452|AAS65079.1| 1067|Drosophila melanogaster CG33287-PA
           protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +3

Query: 306 ENDINVQIRFGSALCD---IQCCIRDANFRQHVICVEYKSYQKLLVKSTQLPHAGSLERE 476
           E  + VQ+   S LCD   I+C   D  F  H      KSY+ L V+S  +P+AG  + E
Sbjct: 212 ETSVKVQVPL-SVLCDCITIRCVHTD--FDHH--SPHAKSYEPLTVESIFMPNAGLTDME 266

Query: 477 YNNLDE 494
            + + E
Sbjct: 267 ESVVGE 272


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,307,678
Number of Sequences: 53049
Number of extensions: 454744
Number of successful extensions: 996
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)