Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18a17
         (236 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1410 + 26363538-26363777,26365421-26365475,26365553-263656...    25   6.5  

>07_03_1410 +
           26363538-26363777,26365421-26365475,26365553-26365644,
           26365732-26365787,26366026-26366101,26366790-26366856,
           26367197-26367263,26368276-26368342,26368759-26368842,
           26369749-26369904,26370641-26370718,26371323-26371391,
           26371476-26371541,26371623-26371751,26372862-26372951,
           26373306-26373371,26373768-26373836,26373903-26374007,
           26374374-26374499,26374687-26374745,26374832-26374868,
           26375370-26375519
          Length = 667

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 122 CKYLIHAHFRNLFKKXXNHILNXXV 48
           CK+LI AH +++ +    H+L   V
Sbjct: 489 CKFLIFAHHQSMLEAIHQHLLKKKV 513


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,714,785
Number of Sequences: 37544
Number of extensions: 40407
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 14,793,348
effective HSP length: 57
effective length of database: 12,653,340
effective search space used: 265720140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)