Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18a15
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457300-1|CAG33581.1| 340|Homo sapiens SRR protein. 51 3e-06
BC074728-1|AAH74728.1| 340|Homo sapiens serine racemase protein. 51 3e-06
AY034081-1|AAK58495.1| 340|Homo sapiens serine racemase protein. 51 3e-06
AK223120-1|BAD96840.1| 340|Homo sapiens serine racemase variant... 51 3e-06
AK023169-1|BAB14442.1| 340|Homo sapiens protein ( Homo sapiens ... 51 3e-06
AF169974-1|AAG27081.1| 340|Homo sapiens serine racemase protein. 51 3e-06
BC091479-1|AAH91479.1| 329|Homo sapiens SDSL protein protein. 46 9e-05
BC009849-1|AAH09849.1| 329|Homo sapiens serine dehydratase-like... 46 9e-05
AF134473-1|AAP97250.1| 329|Homo sapiens serine dehydratase-2 pr... 46 9e-05
AL834378-1|CAD39041.1| 288|Homo sapiens hypothetical protein pr... 37 0.073
AY743708-1|AAW66463.1| 66|Homo sapiens serine racemase protein. 36 0.17
AY743707-1|AAW66462.1| 66|Homo sapiens serine racemase protein. 36 0.17
AY743706-1|AAW66461.1| 66|Homo sapiens serine racemase protein. 36 0.17
AY743705-1|AAW66460.1| 66|Homo sapiens serine racemase protein. 36 0.17
>CR457300-1|CAG33581.1| 340|Homo sapiens SRR protein.
Length = 340
Score = 51.2 bits (117), Expect = 3e-06
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLN-VLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN V
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 318 LLP--LDKKKIGVVIASIGNDAIGICHYGAKL-GXXXXXXXXXXXXXCKLQNCYSLGAKV 488
L+P L++K VV S GN + Y AKL G CK + GA +
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALT-YAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASI 125
Query: 489 ILEGSNLTESQRFARSLAKDKGLTYINARDHPHILMGLRYISTGKFWNKFRLVEAVI 659
+ + + A+ + ++ ++ P ++ G I+ + N+ LV+A++
Sbjct: 126 VYCEPSDESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIAL-EVLNQVPLVDALV 181
>BC074728-1|AAH74728.1| 340|Homo sapiens serine racemase protein.
Length = 340
Score = 51.2 bits (117), Expect = 3e-06
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLN-VLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN V
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 318 LLP--LDKKKIGVVIASIGNDAIGICHYGAKL-GXXXXXXXXXXXXXCKLQNCYSLGAKV 488
L+P L++K VV S GN + Y AKL G CK + GA +
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALT-YAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASI 125
Query: 489 ILEGSNLTESQRFARSLAKDKGLTYINARDHPHILMGLRYISTGKFWNKFRLVEAVI 659
+ + + A+ + ++ ++ P ++ G I+ + N+ LV+A++
Sbjct: 126 VYCEPSDESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIAL-EVLNQVPLVDALV 181
>AY034081-1|AAK58495.1| 340|Homo sapiens serine racemase protein.
Length = 340
Score = 51.2 bits (117), Expect = 3e-06
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLN-VLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN V
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 318 LLP--LDKKKIGVVIASIGNDAIGICHYGAKL-GXXXXXXXXXXXXXCKLQNCYSLGAKV 488
L+P L++K VV S GN + Y AKL G CK + GA +
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALT-YAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASI 125
Query: 489 ILEGSNLTESQRFARSLAKDKGLTYINARDHPHILMGLRYISTGKFWNKFRLVEAVI 659
+ + + A+ + ++ ++ P ++ G I+ + N+ LV+A++
Sbjct: 126 VYCEPSDESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIAL-EVLNQVPLVDALV 181
>AK223120-1|BAD96840.1| 340|Homo sapiens serine racemase variant
protein.
Length = 340
Score = 51.2 bits (117), Expect = 3e-06
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLN-VLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN V
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 318 LLP--LDKKKIGVVIASIGNDAIGICHYGAKL-GXXXXXXXXXXXXXCKLQNCYSLGAKV 488
L+P L++K VV S GN + Y AKL G CK + GA +
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALT-YAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASI 125
Query: 489 ILEGSNLTESQRFARSLAKDKGLTYINARDHPHILMGLRYISTGKFWNKFRLVEAVI 659
+ + + A+ + ++ ++ P ++ G I+ + N+ LV+A++
Sbjct: 126 VYCEPSDESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIAL-EVLNQVPLVDALV 181
>AK023169-1|BAB14442.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ13107 fis, clone NT2RP3002501, weakly similar to
THREONINE DEHYDRATASE CATABOLIC (EC 4.2.1.16). ).
Length = 340
Score = 51.2 bits (117), Expect = 3e-06
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLN-VLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN V
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 318 LLP--LDKKKIGVVIASIGNDAIGICHYGAKL-GXXXXXXXXXXXXXCKLQNCYSLGAKV 488
L+P L++K VV S GN + Y AKL G CK + GA +
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALT-YAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASI 125
Query: 489 ILEGSNLTESQRFARSLAKDKGLTYINARDHPHILMGLRYISTGKFWNKFRLVEAVI 659
+ + + A+ + ++ ++ P ++ G I+ + N+ LV+A++
Sbjct: 126 VYCEPSDESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIAL-EVLNQVPLVDALV 181
>AF169974-1|AAG27081.1| 340|Homo sapiens serine racemase protein.
Length = 340
Score = 51.2 bits (117), Expect = 3e-06
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLN-VLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN V
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 318 LLP--LDKKKIGVVIASIGNDAIGICHYGAKL-GXXXXXXXXXXXXXCKLQNCYSLGAKV 488
L+P L++K VV S GN + Y AKL G CK + GA +
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALT-YAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASI 125
Query: 489 ILEGSNLTESQRFARSLAKDKGLTYINARDHPHILMGLRYISTGKFWNKFRLVEAVI 659
+ + + A+ + ++ ++ P ++ G I+ + N+ LV+A++
Sbjct: 126 VYCEPSDESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIAL-EVLNQVPLVDALV 181
>BC091479-1|AAH91479.1| 329|Homo sapiens SDSL protein protein.
Length = 329
Score = 46.4 bits (105), Expect = 9e-05
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Frame = +3
Query: 186 PFITKTPCMPSHHQREFT-MKLYYKIESMQITGSFKERGSLNVLQLLPLDKKKIGVVIAS 362
PF TP + S + M ++ K E++Q +GSFK RG + Q + K +V +S
Sbjct: 13 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMA-KKGCRHLVCSS 71
Query: 363 IGNDAIGICHYGAKLGXXXXXXXXXXXXXCKLQNCYSLGAKVILEGSNLTESQRFARSLA 542
GN I + KLG +Q GA+V L G E+ A+ LA
Sbjct: 72 GGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDEANLRAQELA 131
Query: 543 KDKGLTYINARDHPHILMG 599
K G + DHP I G
Sbjct: 132 KRDGWENVPPFDHPLIWKG 150
>BC009849-1|AAH09849.1| 329|Homo sapiens serine dehydratase-like
protein.
Length = 329
Score = 46.4 bits (105), Expect = 9e-05
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Frame = +3
Query: 186 PFITKTPCMPSHHQREFT-MKLYYKIESMQITGSFKERGSLNVLQLLPLDKKKIGVVIAS 362
PF TP + S + M ++ K E++Q +GSFK RG + Q + K +V +S
Sbjct: 13 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMA-KKGCRHLVCSS 71
Query: 363 IGNDAIGICHYGAKLGXXXXXXXXXXXXXCKLQNCYSLGAKVILEGSNLTESQRFARSLA 542
GN I + KLG +Q GA+V L G E+ A+ LA
Sbjct: 72 GGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDEANLRAQELA 131
Query: 543 KDKGLTYINARDHPHILMG 599
K G + DHP I G
Sbjct: 132 KRDGWENVPPFDHPLIWKG 150
>AF134473-1|AAP97250.1| 329|Homo sapiens serine dehydratase-2
protein.
Length = 329
Score = 46.4 bits (105), Expect = 9e-05
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Frame = +3
Query: 186 PFITKTPCMPSHHQREFT-MKLYYKIESMQITGSFKERGSLNVLQLLPLDKKKIGVVIAS 362
PF TP + S + M ++ K E++Q +GSFK RG + Q + K +V +S
Sbjct: 13 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMA-KKGCRHLVCSS 71
Query: 363 IGNDAIGICHYGAKLGXXXXXXXXXXXXXCKLQNCYSLGAKVILEGSNLTESQRFARSLA 542
GN I + KLG +Q GA+V L G E+ A+ LA
Sbjct: 72 GGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDEANLRAQELA 131
Query: 543 KDKGLTYINARDHPHILMG 599
K G + DHP I G
Sbjct: 132 KRDGWENVPPFDHPLIWKG 150
>AL834378-1|CAD39041.1| 288|Homo sapiens hypothetical protein
protein.
Length = 288
Score = 36.7 bits (81), Expect = 0.073
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = +3
Query: 279 GSFKERGSLN-VLQLLP--LDKKKIGVVIASIGNDAIGICHYGAKL-GXXXXXXXXXXXX 446
GSFK RG+LN V L+P L++K VV S GN + Y AKL G
Sbjct: 1 GSFKIRGALNAVRSLVPDALERKPKAVVTHSSGNHGQALT-YAAKLEGIPAYIVVPQTAP 59
Query: 447 XCKLQNCYSLGAKVILEGSNLTESQRFARSLAKDKGLTYINARDHPHILMGLRYISTGKF 626
CK + GA ++ + + A+ + ++ ++ P ++ G I+ +
Sbjct: 60 DCKKLAIQAYGASIVYCEPSDESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIAL-EV 118
Query: 627 WNKFRLVEAVI 659
N+ LV+A++
Sbjct: 119 LNQVPLVDALV 129
>AY743708-1|AAW66463.1| 66|Homo sapiens serine racemase protein.
Length = 66
Score = 35.5 bits (78), Expect = 0.17
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLNVLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN ++
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVR 65
>AY743707-1|AAW66462.1| 66|Homo sapiens serine racemase protein.
Length = 66
Score = 35.5 bits (78), Expect = 0.17
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLNVLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN ++
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVR 65
>AY743706-1|AAW66461.1| 66|Homo sapiens serine racemase protein.
Length = 66
Score = 35.5 bits (78), Expect = 0.17
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLNVLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN ++
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVR 65
>AY743705-1|AAW66460.1| 66|Homo sapiens serine racemase protein.
Length = 66
Score = 35.5 bits (78), Expect = 0.17
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFTMK-LYYKIESMQITGSFKERGSLNVLQ 317
I + +V+ A + I TP + S + T + L++K E Q TGSFK RG+LN ++
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVR 65
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,900,860
Number of Sequences: 237096
Number of extensions: 1810958
Number of successful extensions: 4070
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4070
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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