Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18a15
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024805-6|AAK39340.1|  448|Caenorhabditis elegans Hypothetical ...   125   2e-29
Z49068-1|CAA88854.2|  499|Caenorhabditis elegans Hypothetical pr...   118   3e-27
Z80219-2|CAB02298.1|  317|Caenorhabditis elegans Hypothetical pr...    48   8e-06
AF025462-8|AAB71004.1|  121|Caenorhabditis elegans Hypothetical ...    31   0.72 
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>AC024805-6|AAK39340.1|  448|Caenorhabditis elegans Hypothetical
           protein Y51H7C.9 protein.
          Length = 448

 Score =  125 bits (302), Expect = 2e-29
 Identities = 65/164 (39%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
 Frame = +3

Query: 111 DEFCDPENPRPIKYDEVKDALERLSPFITKTPCMPSHH-QREFTMKLYYKIESMQITGSF 287
           D FCDPENP+ +++ ++  A  R+   I +T C  S    + F M +Y K+E  Q TGSF
Sbjct: 28  DVFCDPENPKILQFGDISMAHHRIQNGIVRTDCRKSRCLSKLFDMNIYLKMEVNQDTGSF 87

Query: 288 KERGSLNVLQLLPLDKKKIGVVIASIGNDAIGICHYGAKLGXXXXXXXXXXXXXCKLQNC 467
           KERG+   LQ LP +KKK GV  AS GN A+ +  +G +LG              K+  C
Sbjct: 88  KERGARYALQNLPEEKKKAGVYAASAGNHALALSLHGKQLGVEVNVVMPKIAPLMKINRC 147

Query: 468 YSLGAKVILEGSNLTESQRFARSLAKDKGLTYINARDHPHILMG 599
             LGA ++++G ++ ES+  A  +A D   TYIN  DH  IL G
Sbjct: 148 QDLGANILVQGEDIAESREIALRMAHDSNGTYINGYDHYDILAG 191


>Z49068-1|CAA88854.2|  499|Caenorhabditis elegans Hypothetical
           protein K01C8.1 protein.
          Length = 499

 Score =  118 bits (285), Expect = 3e-27
 Identities = 63/165 (38%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
 Frame = +3

Query: 108 FDEFCDPENPRPIKYDEVKDALERLSPFITKTPCMPSHH-QREFTMKLYYKIESMQITGS 284
           FD  CDPENP+ +K+ ++  A   +   +  TPC+ S     +  M LY+K E +Q+TGS
Sbjct: 87  FDPDCDPENPKKLKFSDISSAAFNIKNGVQTTPCVRSLQLSSKCEMDLYFKKEYLQVTGS 146

Query: 285 FKERGSLNVLQLLPLDKKKIGVVIASIGNDAIGICHYGAKLGXXXXXXXXXXXXXCKLQN 464
           FKERG+   L  +    KK GV+ AS GN A+ + ++G ++G              K+Q 
Sbjct: 147 FKERGARYALSKMAEQFKKAGVIAASAGNHALALSYHGQQMGIPVTVVMPVIAPLMKIQF 206

Query: 465 CYSLGAKVILEGSNLTESQRFARSLAKDKGLTYINARDHPHILMG 599
           C SLGA VIL+G ++  ++ FA   AK+  L YIN  D   IL G
Sbjct: 207 CRSLGATVILKGESIAVAKDFALRHAKENHLKYINGYDAIDILAG 251


>Z80219-2|CAB02298.1|  317|Caenorhabditis elegans Hypothetical
           protein T01H8.2 protein.
          Length = 317

 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
 Frame = +3

Query: 144 IKYDEVKDALERLSPFITKTPCMPSHHQREFT---MKLYYKIESMQITGSFKERGSLNVL 314
           I  +E++ A +R +PF+ KT  + S +  E       + +K E +Q TGSFK RG+LN  
Sbjct: 5   ITMEEMRAAYQRTAPFLHKTLVITSENIDEKVGNGTHVLFKCEHLQKTGSFKARGALN-S 63

Query: 315 QLLPLDKKKIGVVIASIGNDAIGICHYGAKLGXXXXXXXXXXXXXCKLQNCYSLGAKVIL 494
            +L  +K   G++  S GN    +     K+G              K++      A ++ 
Sbjct: 64  AILAKEKNAKGMIAHSSGNHGQALAWAAQKIGLPCTIVVPKNAPISKIEGMREYNANIVF 123

Query: 495 EGSNLTESQRFARSLAK 545
               +T  +     L +
Sbjct: 124 CEPTVTSRESVCADLTE 140


>AF025462-8|AAB71004.1|  121|Caenorhabditis elegans Hypothetical
           protein K10F12.6 protein.
          Length = 121

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 538 WRKIKDLRILTH-ATILTSLWGYGTLALENFGTNSAWLKQLL 660
           +R +K L  +TH ATI T  W  G+++    G +  W+K  L
Sbjct: 76  FRSLKQLETVTHNATIRTFFWKDGSVSSSTGGNDGFWIKDEL 117


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
            protein W09B6.1a protein.
          Length = 2054

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 523  DLRDRWRKIKDLRILTHATILTS 591
            D  DRW+++K + ++ H T LT+
Sbjct: 1932 DAHDRWQRMKSVGVVEHVTSLTN 1954


>Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical
           protein R06A4.4a protein.
          Length = 883

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 95  ARHNDTGQRVRKSICRIL 42
           ARHND  + V+K +CR L
Sbjct: 217 ARHNDNDEEVQKQLCRSL 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,059,001
Number of Sequences: 27780
Number of extensions: 309238
Number of successful extensions: 758
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)