Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18a07
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF050630-1|AAD09205.1|  884|Drosophila melanogaster Ahr homolog ...    29   3.9  
AE014297-2199|AAF55308.1|  884|Drosophila melanogaster CG6993-PA...    29   3.9  

>AF050630-1|AAD09205.1|  884|Drosophila melanogaster Ahr homolog
           spineless protein.
          Length = 884

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 191 QIMHGHSNPTTAPPQLLHQYI*NNSSKKLSKFAYKENPTK-KLKINGSIVSI 343
           +++HG +  T  PP  L  Y        L +  +KEN  K K K++ S+VS+
Sbjct: 233 KVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284


>AE014297-2199|AAF55308.1|  884|Drosophila melanogaster CG6993-PA
           protein.
          Length = 884

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 191 QIMHGHSNPTTAPPQLLHQYI*NNSSKKLSKFAYKENPTK-KLKINGSIVSI 343
           +++HG +  T  PP  L  Y        L +  +KEN  K K K++ S+VS+
Sbjct: 233 KVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,800,883
Number of Sequences: 53049
Number of extensions: 385649
Number of successful extensions: 826
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)