Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17p23
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021136-1|AAH21136.1|  250|Homo sapiens interferon, gamma-induc...    57   5e-08
AF097362-1|AAF04618.1|  261|Homo sapiens gamma-interferon induci...    57   5e-08
AB049659-1|BAC98466.1|  250|Homo sapiens legumaturain protein.         57   5e-08
BC031020-1|AAH31020.1|  250|Homo sapiens interferon, gamma-induc...    57   7e-08
J03909-1|AAA36105.1|  303|Homo sapiens gamma-interferon-inducibl...    50   6e-06
AK123477-1|BAC85622.1|  148|Homo sapiens protein ( Homo sapiens ...    38   0.025

>BC021136-1|AAH21136.1|  250|Homo sapiens interferon,
           gamma-inducible protein 30 protein.
          Length = 250

 Score = 57.2 bits (132), Expect = 5e-08
 Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +2

Query: 407 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 583
           V ++++YE+ C   + F++ +L PT   + + +++ L+P+G A   N +G   F+CQHG 
Sbjct: 62  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 121

Query: 584 PECFGTLIQDCTLNEM 631
            EC    ++ C L+E+
Sbjct: 122 EECKFNKVEACVLDEL 137


>AF097362-1|AAF04618.1|  261|Homo sapiens gamma-interferon inducible
           lysosomal thiol reductase protein.
          Length = 261

 Score = 57.2 bits (132), Expect = 5e-08
 Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +2

Query: 407 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 583
           V ++++YE+ C   + F++ +L PT   + + +++ L+P+G A   N +G   F+CQHG 
Sbjct: 73  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 132

Query: 584 PECFGTLIQDCTLNEM 631
            EC    ++ C L+E+
Sbjct: 133 EECKFNKVEACVLDEL 148


>AB049659-1|BAC98466.1|  250|Homo sapiens legumaturain protein.
          Length = 250

 Score = 57.2 bits (132), Expect = 5e-08
 Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +2

Query: 407 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 583
           V ++++YE+ C   + F++ +L PT   + + +++ L+P+G A   N +G   F+CQHG 
Sbjct: 62  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 121

Query: 584 PECFGTLIQDCTLNEM 631
            EC    ++ C L+E+
Sbjct: 122 EECKFNKVEACVLDEL 137


>BC031020-1|AAH31020.1|  250|Homo sapiens interferon,
           gamma-inducible protein 30 protein.
          Length = 250

 Score = 56.8 bits (131), Expect = 7e-08
 Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +2

Query: 407 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 583
           V ++++YE+ C   + F++ +L PT   + + +++ L+P+G A   N +G   F+CQHG 
Sbjct: 62  VNVTLYYEALCGGCQAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 121

Query: 584 PECFGTLIQDCTLNEM 631
            EC    ++ C L+E+
Sbjct: 122 EECKFNKVEACVLDEL 137


>J03909-1|AAA36105.1|  303|Homo sapiens gamma-interferon-inducible
           protein precursor protein.
          Length = 303

 Score = 50.4 bits (115), Expect = 6e-06
 Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +2

Query: 407 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHGP 583
           V ++++YE+ C   + F++ +L PT   + + +++  +P+G A   N +G   F+CQ G 
Sbjct: 73  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTSVPYGNAQEQNVSGRWEFKCQLGE 132

Query: 584 PECFGTLIQDCTLNEM 631
            EC    ++ C L+E+
Sbjct: 133 EECKFNKVEACVLDEL 148


>AK123477-1|BAC85622.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41483 fis, clone BRTHA2002808, highly  similar
           to GAMMA-INTERFERON-INDUCIBLE PROTEIN IP-30 PRECURSOR.
           ).
          Length = 148

 Score = 38.3 bits (85), Expect = 0.025
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 497 DYIDLQLIPFGKASSINNGGDG-FECQHGPPECFGTLIQDCTLNEM 631
           + +++ L+P+G A   N  G   F+CQHG  EC    ++ C L+E+
Sbjct: 2   EILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,302,558
Number of Sequences: 237096
Number of extensions: 2035703
Number of successful extensions: 3658
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3653
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)