Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17p15
         (462 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113368-1|AAM29373.1|  789|Drosophila melanogaster LD32039p pro...    28   5.3  
AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protei...    28   5.3  
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.      28   5.3  
AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB...    28   5.3  
AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA...    28   5.3  
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P...    28   7.0  

>AY113368-1|AAM29373.1|  789|Drosophila melanogaster LD32039p
           protein.
          Length = 789

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 111 GEDQNFSKSKKMVKTNSNKCTCNVHQQCQPESGPGVHFQESP 236
           GED++    K+  KT++ K      Q+ + +  PG   QE+P
Sbjct: 378 GEDKDKDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENP 419


>AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protein
            protein.
          Length = 1982

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 111  GEDQNFSKSKKMVKTNSNKCTCNVHQQCQPESGPGVHFQESP 236
            GED++    K+  KT++ K      Q+ + +  PG   QE+P
Sbjct: 1571 GEDKDKDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENP 1612


>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
          Length = 1518

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 111  GEDQNFSKSKKMVKTNSNKCTCNVHQQCQPESGPGVHFQESP 236
            GED++    K+  KT++ K      Q+ + +  PG   QE+P
Sbjct: 1107 GEDKDKDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENP 1148


>AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB,
            isoform B protein.
          Length = 1983

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 111  GEDQNFSKSKKMVKTNSNKCTCNVHQQCQPESGPGVHFQESP 236
            GED++    K+  KT++ K      Q+ + +  PG   QE+P
Sbjct: 1572 GEDKDKDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENP 1613


>AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA,
            isoform A protein.
          Length = 1982

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 111  GEDQNFSKSKKMVKTNSNKCTCNVHQQCQPESGPGVHFQESP 236
            GED++    K+  KT++ K      Q+ + +  PG   QE+P
Sbjct: 1571 GEDKDKDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENP 1612


>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
           protein.
          Length = 2695

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +3

Query: 84  KKDRKEEMYGEDQNFSKSKKMVKTNSNKCTCNVHQQCQPESGPGVHFQE 230
           K DR+   + E++N   S   +  +S +   + HQQC  +S     +Q+
Sbjct: 397 KNDRENAEFDENKNSGNSMPGLFADSEELLASAHQQCLDKSWRSQIYQQ 445


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,028,497
Number of Sequences: 53049
Number of extensions: 298378
Number of successful extensions: 744
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)