Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17p11
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 31 0.53
AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical... 31 0.53
U10401-7|AAA19056.1| 504|Caenorhabditis elegans Hypothetical pr... 29 2.1
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 29 3.7
Z92786-6|CAB07208.1| 569|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical p... 27 8.6
Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical pr... 27 8.6
U88168-2|AAC24398.1| 108|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -1
Query: 504 MRIAISYRFVNRNLY--FDISRYTILLDVMRIGISYRFVNISNIRLVR-IESARVSERTI 334
M I +S N Y F +ILL+ MR+GI+ + RLVR + R +
Sbjct: 770 MHIGLSDEVTNSKEYANFYARMRSILLEPMRLGIARESSSDETKRLVRCLAEERACDEEQ 829
Query: 333 EISCDE*NRNR 301
+++CD+ R R
Sbjct: 830 QVTCDQIRRRR 840
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -1
Query: 504 MRIAISYRFVNRNLY--FDISRYTILLDVMRIGISYRFVNISNIRLVR-IESARVSERTI 334
M I +S N Y F +ILL+ MR+GI+ + RLVR + R +
Sbjct: 770 MHIGLSDEVTNSKEYANFYARMRSILLEPMRLGIARESSSDETKRLVRCLAEERACDEEQ 829
Query: 333 EISCDE*NRNR 301
+++CD+ R R
Sbjct: 830 QVTCDQIRRRR 840
>AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical
protein Y105C5A.17 protein.
Length = 337
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/80 (23%), Positives = 42/80 (52%)
Frame = -1
Query: 519 ILLDVMRIAISYRFVNRNLYFDISRYTILLDVMRIGISYRFVNISNIRLVRIESARVSER 340
I ++V R Y F++ ++ I+ + ++ I +Y ++ N+ L ++ VS +
Sbjct: 249 IYINVFRKLFQY-FLHISILKQIANENMFRPIIAISHAY---SVQNMILQNTVNSTVSSK 304
Query: 339 TIEISCDE*NRNRHYPYNCK 280
+ +I C++ R+ P+NCK
Sbjct: 305 SNKIMCEKTQMLRNLPFNCK 324
>U10401-7|AAA19056.1| 504|Caenorhabditis elegans Hypothetical
protein T20B12.3 protein.
Length = 504
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 422 ITSSNIVYRLISKYRFRFTNRYDMAMRITSSNIVY 526
I S ++RLIS++ F + YD +T+ +++Y
Sbjct: 248 ILSLGAIFRLISEHNFEYPKFYDKVYSLTNPSLLY 282
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform a protein.
Length = 1595
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 323 HDISIVRSLTLADSIRTKRILLILTNRYDMPMRITSSN-IVYRLISKYRFRFT 478
H + + R+++L ++I + + R D PM I+SSN +V +IS Y + T
Sbjct: 1455 HSLRMNRAVSLPNAISNAGQINGVEKRSDTPMSISSSNSMVTSIISPYNDKLT 1507
>Z92786-6|CAB07208.1| 569|Caenorhabditis elegans Hypothetical
protein F47H4.9 protein.
Length = 569
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 213 KEVSTFDPNLNAV*PICIVE-FNFTRFDLELKFLDK 109
KE F+ + N + I I F+F+RFD+ LK L K
Sbjct: 463 KEAKNFESSRNCIMTIPIENLFHFSRFDVSLKSLSK 498
>Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical
protein W02B12.12b protein.
Length = 359
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 258 MSVDYS*RISRIQFRKEVSTFDPNLNAV*PICIVEFNFTRFDLELKFLDK 109
M +D S ++ R ++ K FD N N V + ++ D+++KFL +
Sbjct: 92 MDLDTSNKLGRGKYSKVYKAFDRNNNRVVAVKAIDTQELTTDVKMKFLPR 141
>Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical
protein W02B12.12a protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 258 MSVDYS*RISRIQFRKEVSTFDPNLNAV*PICIVEFNFTRFDLELKFLDK 109
M +D S ++ R ++ K FD N N V + ++ D+++KFL +
Sbjct: 92 MDLDTSNKLGRGKYSKVYKAFDRNNNRVVAVKAIDTQELTTDVKMKFLPR 141
>U88168-2|AAC24398.1| 108|Caenorhabditis elegans Hypothetical
protein K11H12.1 protein.
Length = 108
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 589 IAAISLNPISP--RTKSIYRYQPIHDIARCDAHRHIVPIRESKSIFRYQPIHD 437
++ +S P++ + K +QP H C++H H VP + ++ FR Q + D
Sbjct: 1 MSTLSEGPVARLLKEKLFAAFQPKHLEVECESHLHNVP-KGAEKHFRVQVVSD 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,314,124
Number of Sequences: 27780
Number of extensions: 276834
Number of successful extensions: 759
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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