Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17p10
         (585 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY311396-1|AAP78476.1|  362|Homo sapiens C14ORF29 variant 1 prot...    33   0.74 
BC034603-1|AAH34603.3|  255|Homo sapiens abhydrolase domain cont...    32   1.3  
BC014049-1|AAH14049.1|  404|Homo sapiens abhydrolase domain cont...    32   1.3  
AY311397-1|AAP78477.1|  255|Homo sapiens C14ORF29 variant 2 prot...    32   1.3  
AL353812-4|CAI13763.1|  398|Homo sapiens abhydrolase domain cont...    32   1.3  
AL353812-3|CAI13762.1|  404|Homo sapiens abhydrolase domain cont...    32   1.3  
AL353812-1|CAI13761.1|  187|Homo sapiens abhydrolase domain cont...    32   1.3  
AL121772-4|CAI23475.1|  398|Homo sapiens abhydrolase domain cont...    32   1.3  
AL121772-3|CAI23474.1|  404|Homo sapiens abhydrolase domain cont...    32   1.3  
AK075023-1|BAC11357.1|  398|Homo sapiens protein ( Homo sapiens ...    32   1.3  
S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1...    29   9.1  
M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen...    29   9.1  
AK092761-1|BAC03968.1|  315|Homo sapiens protein ( Homo sapiens ...    29   9.1  
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag...    29   9.1  

>AY311396-1|AAP78476.1|  362|Homo sapiens C14ORF29 variant 1
           protein.
          Length = 362

 Score = 33.1 bits (72), Expect = 0.74
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 IRLGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           + LGIWH +P+   +D A  K    +       NP+I+Y HG+A
Sbjct: 107 VMLGIWHTVPSCRGED-AKGKDCCWYEAALRDGNPIIVYLHGSA 149


>BC034603-1|AAH34603.3|  255|Homo sapiens abhydrolase domain
           containing 12B protein.
          Length = 255

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 414 LGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           LGIWH +P+   +D A  K    +       NP+I+Y HG+A
Sbjct: 2   LGIWHTVPSCRGED-AKGKDCCWYEAALRDGNPIIVYLHGSA 42


>BC014049-1|AAH14049.1|  404|Homo sapiens abhydrolase domain
           containing 12 protein.
          Length = 404

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 IRLGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           + +G+WH +P    K+ A  K    + +   S +P+ILY HG A
Sbjct: 136 VTIGVWHTVPAVWWKN-AQGKDQMWYEDALASSHPIILYLHGNA 178


>AY311397-1|AAP78477.1|  255|Homo sapiens C14ORF29 variant 2
           protein.
          Length = 255

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 414 LGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           LGIWH +P+   +D A  K    +       NP+I+Y HG+A
Sbjct: 2   LGIWHTVPSCRGED-AKGKDCCWYEAALRDGNPIIVYLHGSA 42


>AL353812-4|CAI13763.1|  398|Homo sapiens abhydrolase domain
           containing 12 protein.
          Length = 398

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 IRLGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           + +G+WH +P    K+ A  K    + +   S +P+ILY HG A
Sbjct: 136 VTIGVWHTVPAVWWKN-AQGKDQMWYEDALASSHPIILYLHGNA 178


>AL353812-3|CAI13762.1|  404|Homo sapiens abhydrolase domain
           containing 12 protein.
          Length = 404

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 IRLGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           + +G+WH +P    K+ A  K    + +   S +P+ILY HG A
Sbjct: 136 VTIGVWHTVPAVWWKN-AQGKDQMWYEDALASSHPIILYLHGNA 178


>AL353812-1|CAI13761.1|  187|Homo sapiens abhydrolase domain
           containing 12 protein.
          Length = 187

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 IRLGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           + +G+WH +P    K+ A  K    + +   S +P+ILY HG A
Sbjct: 91  VTIGVWHTVPAVWWKN-AQGKDQMWYEDALASSHPIILYLHGNA 133


>AL121772-4|CAI23475.1|  398|Homo sapiens abhydrolase domain
           containing 12 protein.
          Length = 398

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 IRLGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           + +G+WH +P    K+ A  K    + +   S +P+ILY HG A
Sbjct: 136 VTIGVWHTVPAVWWKN-AQGKDQMWYEDALASSHPIILYLHGNA 178


>AL121772-3|CAI23474.1|  404|Homo sapiens abhydrolase domain
           containing 12 protein.
          Length = 404

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 IRLGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           + +G+WH +P    K+ A  K    + +   S +P+ILY HG A
Sbjct: 136 VTIGVWHTVPAVWWKN-AQGKDQMWYEDALASSHPIILYLHGNA 178


>AK075023-1|BAC11357.1|  398|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90542 fis, clone OVARC1000307. ).
          Length = 398

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 IRLGIWHILPNSEIKDVADLKTNNTFHELKNSRNPVILYCHGTA 539
           + +G+WH +P    K+ A  K    + +   S +P+ILY HG A
Sbjct: 136 VTIGVWHTVPAVWWKN-AQGKDQMWYEDALASSHPIILYLHGNA 178


>S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1
           chain protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 250 SSGPFYCIGTSGAARQLGIPGRRPSAKRPSLRGAQKP 140
           S G   C+G+ G     G+PG+R     P +RG+  P
Sbjct: 592 SEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGP 628


>M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen
            protein.
          Length = 1603

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 250  SSGPFYCIGTSGAARQLGIPGRRPSAKRPSLRGAQKP 140
            S G   C+G+ G     G+PG+R     P +RG+  P
Sbjct: 1009 SEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGP 1045


>AK092761-1|BAC03968.1|  315|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35442 fis, clone SMINT2003128. ).
          Length = 315

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -3

Query: 259 IPLSSGPFYCIGTSGAARQLGIPGRRPSAKRPSLRGAQKPC 137
           +PL +    C  TS   +     GRR S  RPS RG   PC
Sbjct: 44  VPLPAHLLLCSSTSLWKKTTSPCGRRSSPCRPSWRGGAGPC 84


>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
           precursor variant protein.
          Length = 1463

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 250 SSGPFYCIGTSGAARQLGIPGRRPSAKRPSLRGAQKP 140
           S G   C+G+ G     G+PG+R     P +RG+  P
Sbjct: 884 SEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGP 920


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,198,437
Number of Sequences: 237096
Number of extensions: 1272020
Number of successful extensions: 3551
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3544
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)