Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17p10
         (585 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001585-1|AAN71340.1|  411|Drosophila melanogaster RE26090p pro...    36   0.053
AE013599-2824|AAM68437.1|  411|Drosophila melanogaster CG15111-P...    36   0.053
AE013599-2823|AAF57599.2|  393|Drosophila melanogaster CG15111-P...    36   0.053
AE014298-120|AAF45561.2|  311|Drosophila melanogaster CG14632-PA...    33   0.28 
AE014298-119|AAN09032.1|  402|Drosophila melanogaster CG14632-PB...    33   0.28 
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro...    29   4.6  
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l...    29   4.6  
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot...    29   4.6  
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p...    29   4.6  
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,...    29   4.6  
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,...    29   4.6  
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,...    29   4.6  

>BT001585-1|AAN71340.1|  411|Drosophila melanogaster RE26090p
           protein.
          Length = 411

 Score = 35.5 bits (78), Expect = 0.053
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 303 VNFPRNLNYDSPSSCSVTCGRNLNIEFRSI-VDNFLIRLGIWHILPNSEIK 452
           + +P+ L+   P S  +   RN  I  +    D   +R+G+WH+LP++ ++
Sbjct: 69  IKYPKGLDLTKPESVGLYATRNFYITVKDHDQDEDGVRVGVWHVLPSNAVR 119


>AE013599-2824|AAM68437.1|  411|Drosophila melanogaster CG15111-PB,
           isoform B protein.
          Length = 411

 Score = 35.5 bits (78), Expect = 0.053
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 303 VNFPRNLNYDSPSSCSVTCGRNLNIEFRSI-VDNFLIRLGIWHILPNSEIK 452
           + +P+ L+   P S  +   RN  I  +    D   +R+G+WH+LP++ ++
Sbjct: 69  IKYPKGLDLTKPESVGLYATRNFYITVKDHDQDEDGVRVGVWHVLPSNAVR 119


>AE013599-2823|AAF57599.2|  393|Drosophila melanogaster CG15111-PA,
           isoform A protein.
          Length = 393

 Score = 35.5 bits (78), Expect = 0.053
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 303 VNFPRNLNYDSPSSCSVTCGRNLNIEFRSI-VDNFLIRLGIWHILPNSEIK 452
           + +P+ L+   P S  +   RN  I  +    D   +R+G+WH+LP++ ++
Sbjct: 51  IKYPKGLDLTKPESVGLYATRNFYITVKDHDQDEDGVRVGVWHVLPSNAVR 101


>AE014298-120|AAF45561.2|  311|Drosophila melanogaster CG14632-PA,
           isoform A protein.
          Length = 311

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 262 RIPLSSGPFYCIGTSGAARQLGIPGRRPSAKRPSLRGAQKP 140
           +IPL+ G F   GT+ A+  +G+P   P++ R   R A +P
Sbjct: 164 QIPLAQGRFTASGTTAASGAIGLPASTPNSPRLLPRRAPRP 204


>AE014298-119|AAN09032.1|  402|Drosophila melanogaster CG14632-PB,
           isoform B protein.
          Length = 402

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 262 RIPLSSGPFYCIGTSGAARQLGIPGRRPSAKRPSLRGAQKP 140
           +IPL+ G F   GT+ A+  +G+P   P++ R   R A +P
Sbjct: 164 QIPLAQGRFTASGTTAASGAIGLPASTPNSPRLLPRRAPRP 204


>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
           protein.
          Length = 1521

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 159 SDGRFADGRRPGIPSCRAAPDV 224
           S G  ADG RPG P C   P+V
Sbjct: 779 SGGESADGSRPGTPLCDERPEV 800


>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
            isoform protein.
          Length = 5554

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 159  SDGRFADGRRPGIPSCRAAPDV 224
            S G  ADG RPG P C   P+V
Sbjct: 1257 SGGESADGSRPGTPLCDERPEV 1278


>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
            protein long isoformprotein.
          Length = 5533

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 159  SDGRFADGRRPGIPSCRAAPDV 224
            S G  ADG RPG P C   P+V
Sbjct: 1263 SGGESADGSRPGTPLCDERPEV 1284


>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
            protein.
          Length = 5476

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 159  SDGRFADGRRPGIPSCRAAPDV 224
            S G  ADG RPG P C   P+V
Sbjct: 1206 SGGESADGSRPGTPLCDERPEV 1227


>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
            isoform C protein.
          Length = 5476

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 159  SDGRFADGRRPGIPSCRAAPDV 224
            S G  ADG RPG P C   P+V
Sbjct: 1206 SGGESADGSRPGTPLCDERPEV 1227


>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
            isoform B protein.
          Length = 5533

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 159  SDGRFADGRRPGIPSCRAAPDV 224
            S G  ADG RPG P C   P+V
Sbjct: 1263 SGGESADGSRPGTPLCDERPEV 1284


>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
            isoform A protein.
          Length = 5560

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 159  SDGRFADGRRPGIPSCRAAPDV 224
            S G  ADG RPG P C   P+V
Sbjct: 1263 SGGESADGSRPGTPLCDERPEV 1284


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,750,238
Number of Sequences: 53049
Number of extensions: 395233
Number of successful extensions: 1237
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)