Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17p06
(596 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 99 4e-22
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 62 5e-11
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 52 6e-08
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 51 1e-07
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 50 3e-07
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 49 5e-07
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 48 8e-07
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 47 2e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 44 2e-05
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 44 2e-05
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 43 3e-05
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 43 4e-05
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 41 1e-04
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 40 3e-04
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 40 3e-04
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 37 0.002
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 35 0.010
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 29 0.39
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 28 1.2
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 1.6
SPBC19G7.02 |||4-amino-4-deoxychorismate lyase |Schizosaccharomy... 26 3.6
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 26 4.8
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 25 6.3
SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces pomb... 25 6.3
SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomy... 25 6.3
SPBC2G2.15c |||mitochondrial 2' O-ribose methyltransferase Mrm2 ... 25 8.4
SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr 1|||M... 25 8.4
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 99.1 bits (236), Expect = 4e-22
Identities = 40/98 (40%), Positives = 68/98 (69%)
Frame = +3
Query: 300 LRSTIMREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEI 479
+RST +RE+ ALT+Q + F+++YDPTIED YRK+ E+D +L++
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDV 60
Query: 480 LDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 593
LDTAG E++++MR+ Y++ G+GF++VY++T+ +F +I
Sbjct: 61 LDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEI 98
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 62.5 bits (145), Expect = 5e-11
Identities = 28/77 (36%), Positives = 48/77 (62%)
Frame = +3
Query: 366 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 545
+LTVQ+V F+E Y PTIE+ + K I+ EI+DTAG ++++ + + G
Sbjct: 21 SLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHG 80
Query: 546 FVVVYSLTNHQTFQDIK 596
+V+VYS+T+ +F+ +K
Sbjct: 81 YVLVYSITSKSSFEMVK 97
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 52.0 bits (119), Expect = 6e-08
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 369 LTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 545
L ++F + E Y TI DF + E++ L+I DTAG E+F ++ Y + G
Sbjct: 24 LLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHG 83
Query: 546 FVVVYSLTNHQTFQDIK 596
++VY +T+ +F ++K
Sbjct: 84 IIIVYDVTDQDSFNNVK 100
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 51.2 bits (117), Expect = 1e-07
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 378 QFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVV 554
QFV+ F +Y TI DF K++ VD+ L++ DTAG E+F S+ + + V+
Sbjct: 27 QFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVI 86
Query: 555 VYSLTNHQTFQDIK 596
VY++ N ++F ++
Sbjct: 87 VYNVNNSKSFDSVE 100
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 49.6 bits (113), Expect = 3e-07
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +3
Query: 315 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTA 491
+R+F +L +F+ F Y TI DF K + +++ L++ DTA
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 492 GTEQFASMRDLYIKNGQGFVVVYSLTNHQTF 584
G E+F S+ YI++ ++VY +TNH +F
Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSF 99
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 49.2 bits (112), Expect = 5e-07
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 378 QFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVV 554
Q+V+ F + Y TI DF KE+ VD+ L++ DTAG E+F S+ + + V+
Sbjct: 27 QYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVL 86
Query: 555 VYSLTNHQTFQDI 593
VY + N ++F+ +
Sbjct: 87 VYDVNNSKSFETL 99
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 48.4 bits (110), Expect = 8e-07
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +3
Query: 369 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGF 548
L + + + F Y PT+ D Y + + + P L + DTAG E + +R L F
Sbjct: 19 LLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVF 78
Query: 549 VVVYSLTNHQTFQDIK 596
+V +S+T+ +F+++K
Sbjct: 79 LVCFSVTSPASFENVK 94
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 47.2 bits (107), Expect = 2e-06
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 369 LTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 545
L ++F F + TI DF + IE+D L+I DTAG E+F ++ Y + G
Sbjct: 25 LLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMG 84
Query: 546 FVVVYSLTNHQTFQDIK 596
+++Y +T+ ++F +++
Sbjct: 85 ILLLYDVTDKKSFDNVR 101
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +3
Query: 381 FVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVY 560
F G F + Y+PTI + Y +I VD + L + DTAG E++ +R L + ++ +
Sbjct: 33 FTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICF 92
Query: 561 SLTNHQTFQDI 593
++ + + +++
Sbjct: 93 AVDSRDSLENV 103
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 43.6 bits (98), Expect = 2e-05
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 366 ALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCV-LEILDTAGTEQFASMRDLYIKNG 539
+L ++FV F + + TI F + + +D + V LEI DTAG E++ S+ +Y +N
Sbjct: 29 SLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNA 88
Query: 540 QGFVVVYSLTNHQTFQDIK 596
+VVY +T + + K
Sbjct: 89 NCAIVVYDITQAASLEKAK 107
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 43.2 bits (97), Expect = 3e-05
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +3
Query: 369 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGF 548
L + F G F E Y PT+ + Y ++EVD L + DTAG E + +R L +
Sbjct: 22 LLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVV 81
Query: 549 VVVYSLTNHQTFQDIK 596
++ +S+ ++ +++
Sbjct: 82 LICFSVDAPESLDNVQ 97
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 42.7 bits (96), Expect = 4e-05
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 369 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGF 548
L + F G F E Y PT+ + Y ++EVD L + DTAG E + +R L +
Sbjct: 22 LLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVI 81
Query: 549 VVVYSLTNHQTFQDIK 596
++ +++ + + +++
Sbjct: 82 LICFAVDSPDSLDNVQ 97
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 41.1 bits (92), Expect = 1e-04
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 426 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 593
+F + I +DN +I DTAG E++ ++ Y + G ++VY +T +F ++
Sbjct: 46 EFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNV 101
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 369 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEIL--DTAGTEQFASMRDLYIKNGQ 542
L + F SG F E+Y PT+ + Y +I + V+E+ DTAG E++ +R L N
Sbjct: 30 LLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSN 89
Query: 543 GFVVVYSL 566
++ +S+
Sbjct: 90 VILLCFSI 97
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 471 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 593
L+I DTAG E+F S+ Y + G V+VY +TN +F+++
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL 104
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +3
Query: 381 FVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVY 560
F G F +Y PT+ + Y + VD L + DTAG E++ +R + +V +
Sbjct: 28 FTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGF 87
Query: 561 SLTNHQTFQDI 593
++ + + +++
Sbjct: 88 AIDSPDSLENV 98
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 34.7 bits (76), Expect = 0.010
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 384 VSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVY 560
++G F +KY T+ + + + + DTAG E+ +RD Y GQ ++++
Sbjct: 30 LTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYIQGQCGIIMF 89
Query: 561 SLTNHQTFQDI 593
+T+ T++++
Sbjct: 90 DVTSRITYKNV 100
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 29.5 bits (63), Expect = 0.39
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 146 FHVN*NNSNCIALITLKTNA-EHNFHSTDVINTSLVPHEQQVG 21
FH + NN C+AL T + F++ D TSL H QVG
Sbjct: 416 FHTS-NNRGCLALFDASTASFVQKFNTADEAFTSLYMHPSQVG 457
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 449 FDFFSVEILYRRIIFFHKTS*YKLHSQRTLSDPTRTQHDHFK 324
FD SV L+RR + + ++ K HS++ S+P+ +H +
Sbjct: 104 FDHASVTSLHRRSLSSNTSTPRKYHSRKPYSEPSVIDKEHLQ 145
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 375 QSTHSFRPHPNPTRPL*IRA 316
Q THS RP PN + PL +R+
Sbjct: 589 QQTHSSRPTPNASSPLDVRS 608
>SPBC19G7.02 |||4-amino-4-deoxychorismate lyase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 231
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 401 GKI*SDDRGFLQKRN-RSGQFSLCFRNF 481
G I DD+G LQK N ++G+ L F +F
Sbjct: 175 GSIHEDDKGLLQKDNLKNGEQVLLFNSF 202
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 588 LETFGGLLMNILLQSLDH-FLYTDLASK 508
LETFGG L++S+ H F Y+ + +K
Sbjct: 132 LETFGGRFSKGLMKSMTHLFTYSGMGAK 159
>SPAC212.04c |||S. pombe specific DUF999 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 424 RISTEKKSKWTILLVF 471
RIST+ KS+W +L+++
Sbjct: 98 RISTQDKSRWVLLIIW 113
>SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 353
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 470 FRNFGHRWHGAVCFDARSVYKKWSRLCSSIFINKPPNVSRHQ 595
F N GH W ++ FD KK C F P R Q
Sbjct: 188 FTNLGHTWQNSILFDKS---KKSILTCLHYFPRDPSQPFRSQ 226
>SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 576 GGLLMNILLQSLDHFLYTDLASK-QTAPCQRCPKFL 472
G L++ L+ LDH LYT L SK TA P L
Sbjct: 165 GAKLLDKCLEVLDHRLYTYLLSKGLTAKIYALPSIL 200
>SPBC2G2.15c |||mitochondrial 2' O-ribose methyltransferase Mrm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 218
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 423 EDFYRKEIEVDN--SPCVLEILDTAGTEQFASMRDLYIKNG 539
+DFYRK+ ++DN S ++++ +F + D+ I G
Sbjct: 16 KDFYRKKSKIDNFRSRAAYKLIELNSKYRFINKEDVVIDVG 56
>SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 585 ETFGGLLMNILLQSLDHFLYTDLASK 508
ET+G + +L L H+LY + SK
Sbjct: 233 ETYGTVSPQVLFVCLGHYLYANACSK 258
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,547,887
Number of Sequences: 5004
Number of extensions: 51499
Number of successful extensions: 127
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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