Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17p05
(638 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.026
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 29 0.43
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 29 0.75
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 28 0.99
SPCC1235.08c |pdh1||DUF1751 family protein|Schizosaccharomyces p... 28 1.3
SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1 |Schizosa... 28 1.3
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 27 1.7
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.0
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 26 4.0
SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyce... 26 4.0
SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subu... 26 5.3
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 26 5.3
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 7.0
SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.0
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 7.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.0
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 25 9.2
SPBC1271.07c |||N-acetyltransferase |Schizosaccharomyces pombe|c... 25 9.2
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 33.5 bits (73), Expect = 0.026
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = +1
Query: 364 ISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNKMNYGVNINEYEKQLQRYQHTLNIAQT 543
+SN+ + S +QE+ L S S+ DN G I E EK++++ +LN QT
Sbjct: 1253 VSNDQTDTPIISGSQEVQLLYESNSVLRK--DNDAKLG-KIQELEKEVEKLNASLNPLQT 1309
Query: 544 EKKNAIRKQMLTKAFKLKLLEVEN 615
E N ++ ++ K L L++ N
Sbjct: 1310 E-INELKAEIGAKTASLNLMKEYN 1332
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 29.5 bits (63), Expect = 0.43
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +1
Query: 166 DNKMNAKDHNNEXGNDVTPQLIDDSEVKLKERIAQCRDIIESXXXXXXXXXXXQNALKVS 345
D+ +N+K +N N PQ +DD + K+ I+ + ++S
Sbjct: 410 DSPLNSKIEDNLIDNLKYPQSLDD-HLSSKKPIS----YFSNKLTHQTLPNVFTQLSELS 464
Query: 346 PAHFESISNNSPTFSLTSN--NQELDDLELSKSIYSTCIDNKMNYGVNINE-YEKQLQRY 516
H S++ T++L Q + + E + +++ +N NY VN E Q +++
Sbjct: 465 KCHEASLAEKQLTYNLAMEALEQTVRETETCQRLWNERTNNDENYLVNQREDLIHQCKKF 524
Query: 517 QHTLNIAQ 540
HTL A+
Sbjct: 525 LHTLKTAR 532
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 28.7 bits (61), Expect = 0.75
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 124 IDNNEQPKLDEKYHDNKMNAKDHNNEXGNDVTPQL 228
+DNN + + + +D ++++ D N NDVT QL
Sbjct: 291 VDNNGRVWMTSQEYDTEVSSTDERNFRANDVTLQL 325
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 28.3 bits (60), Expect = 0.99
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 499 SHTH*Y*LHSSFYCRCTYYRCFLIILDHPVLD 404
S+TH Y +H + CRC Y FL +L P L+
Sbjct: 312 SYTHRYPVHRAIMCRCEY---FLDMLAGPFLE 340
>SPCC1235.08c |pdh1||DUF1751 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 226
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 591 FKSFC*HLLPNSVFLFRLSYI*CVLISLKLFLILIDI 481
F C HL+PN++FLF + I + +F +L I
Sbjct: 42 FFLLCFHLVPNALFLFPWTIITTSFVDANVFTLLSSI 78
>SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -3
Query: 417 IQFLIIRSQRKCGTVIGNGFKMSR 346
+ ++ R+QRK TVI +GFK+SR
Sbjct: 19 LDVVLSRTQRKTPTVIRSGFKISR 42
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 340 VSPAHFESISNNSPTFSLTSNNQELDDLELSKS 438
V P HFE + S TF ++N L +SKS
Sbjct: 5 VDPVHFERLKIQSVTFGSANDNASLQVHNVSKS 37
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/75 (17%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 325 QNALKVSPAHFESISNNSPTFSLTSNNQ----ELDDLELSKSIYSTCIDNKMNYGVNINE 492
+ +S +HF S+ N S SNN+ D+ L+ +S ++ + N+
Sbjct: 149 EGVTSLSDSHFNSLEANLKAISKDSNNKAHNNRYDESSLTNPEFSILVERLKSIEENLQS 208
Query: 493 YEKQLQRYQHTLNIA 537
++++ + +++++
Sbjct: 209 LQERISHCERSVSLS 223
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 340 VSPAHFESISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNK 465
VS H E NN+ FSLT++ Q ++ S + +D++
Sbjct: 127 VSQIHTEQNFNNNDAFSLTNSQQAFSEIGYDASNWIDELDSQ 168
>SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 170
Score = 26.2 bits (55), Expect = 4.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 570 LLPNSVFLFRLSYI*CVLISLKLFLILIDINSIVHFIVDARTIDAF 433
LL +S+F FRLS + SL ++ I S V VDA AF
Sbjct: 3 LLDSSIFRFRLSSLHVSSRSLGVYFAGIMFASAVWVFVDAALYSAF 48
>SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subunit
Rpc82 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 25.8 bits (54), Expect = 5.3
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +1
Query: 361 SISNNSPTFSLTS---NNQELDDLELSKSIYSTCID-NKMNYGVNINEYEKQLQRYQHTL 528
SISN SP F+LT+ +D+++ SI N + + + E +L
Sbjct: 310 SISNQSPVFTLTTMELTRNFPNDIDVESSIVDKQYSVNSASNELRVMEKLNELDELAEED 369
Query: 529 NIAQTEKKNAIRKQMLTKAFKLKLL 603
N ++ +NA RK + A L+LL
Sbjct: 370 NYEESVDENANRKSKVL-AQHLELL 393
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 463 KMNYGVNINEYEKQLQRYQHTLNIAQTEKKNAIRKQMLTK-AFKLKLL 603
+ NY + EY++Q+ Y + ++E + Q + + KLKLL
Sbjct: 910 RANYSTRLEEYQRQINSYNVRVAQIKSEHQRRCESQPIPEDEAKLKLL 957
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 334 LKVSPAHFESISNNSPTFSLTSNNQEL 414
L+ SP H + +S++ T SL +NN L
Sbjct: 519 LRGSPIHNQPVSSSKSTASLNTNNNGL 545
>SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 243
Score = 25.4 bits (53), Expect = 7.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 478 VNINEYEKQLQRYQHTLNIAQTEKKNAIRKQMLTKAFKLKLLEVENQ 618
VN++ +E++ RY+ T + E+K R+ + +A K KL+ + +
Sbjct: 10 VNVSRHEQKRIRYKLTPEEVKAERKERKRRAAIQRAEK-KLIRAKGE 55
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 346 PAHFESISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNKMNYGVNINEYEKQLQRYQHT 525
P + S + T S N + + LS + +DN + N+ E+Q +R+Q T
Sbjct: 160 PVEESNTSLDMSTISSELQNIRIQQMNLSNELSRIQVDNAALWQENMENRERQ-RRHQET 218
Query: 526 LN 531
++
Sbjct: 219 ID 220
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 340 VSPAHFESISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNKMNYGVNINEY 495
VS +IS+N P+ + +S +Q + L+ S+Y + ++ + NEY
Sbjct: 761 VSSTTVSNISSNLPSATASSQSQLTNSSTLATSLYLSSSSSRTISTSSTNEY 812
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 9.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 NNEQPKLDEKYHDNKMNAKDHNNEXGNDVTPQLID-DSEVKLKER 261
NNE+P +++ D N++ N+ T +L D D E LK R
Sbjct: 356 NNEEPNSVVAEDGSEIITLDENDQSPNEATEKLRDNDLEESLKMR 400
>SPBC1271.07c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 163
Score = 25.0 bits (52), Expect = 9.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 145 KLDEKYHDNKMNAKDHNNEXGNDVTPQLIDD 237
KL + D KM +++ E G D+T Q +DD
Sbjct: 13 KLPQDLDDFKMLVQEYLQEFGMDLTFQNVDD 43
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,012,790
Number of Sequences: 5004
Number of extensions: 35184
Number of successful extensions: 134
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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